Paenibacillus thiaminolyticus: NDS46_17870
Help
Entry
NDS46_17870 CDS
T08812
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pthi03032
]
NDS46_17870
03036 Chromosome and associated proteins [BR:
pthi03036
]
NDS46_17870
03400 DNA repair and recombination proteins [BR:
pthi03400
]
NDS46_17870
DNA replication proteins [BR:
pthi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NDS46_17870
Chromosome and associated proteins [BR:
pthi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NDS46_17870
DNA repair and recombination proteins [BR:
pthi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NDS46_17870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
DUF2267
HATPase_c_2
Sigma70_r3
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
WCF06226
LinkDB
All DBs
Position
complement(3929251..3929523)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELITEVAESTELSKKDVTKVVDAVFEAISNALQNGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPASKIPAFKPGKALKDGIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatccgaattgattaccgaggttgcagagtccacggagttgtccaagaaagac
gtgacgaaagtggtagacgccgtcttcgaagccatttcgaacgcgctgcagaacggtgac
aaggtccaattggtaggcttcggcaacttcgaagtgcgcgagcgctccgcccgcaaagga
cggaacccgcaaacgggtgaagaaatcgaaattcctgcgagcaagatccctgcgttcaaa
ccgggtaaagcacttaaagacggcatcaaataa
DBGET
integrated database retrieval system
