Paenibacillus thiaminolyticus: NDS46_19460
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Entry
NDS46_19460 CDS
T08812
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
pthi
Paenibacillus thiaminolyticus
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
PAS_4
PAS_9
Sigma54_activ_2
PAS
PAS_8
AAA_16
PAS_10
HTH_30
Diguanyl_cycl_sensor
AAA
Cache_WalK
AAA_5
Motif
Other DBs
NCBI-ProteinID:
WCF06523
LinkDB
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Position
complement(4268567..4269853)
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AA seq
428 aa
AA seq
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MSQSGVMEAVLSVLLGAMNDAVTVIDNEGTVLYWNRVAEETYGINGADIIGHKIGDFFQR
ESIMLFQVMDSGSAVHQVYHEPRPGMHVMISAAPITDQAGKPLGALSIERDVSSYVKLSA
EMYHHPAGQPLLPAVFPSALLQRLQTAFSIGQPLLLAGEGGVGRTSMAEWLHRSASRSGR
FVMVSCSTVPEGMLEAELFGYQGGEERPGKLDLAADGTLYLRDIDALPPSMQEKLAAMLR
LSRFERLGGTASVPLQCRICGSVGPEAAAEEPDRLLPSLRYAFQLYTVPPLRERKQDLPE
LCRVFLHQAAAKAGITAPELAPDALAAVFACDWPGNLSQLRNAMEYAAAAAAGSGAVTSA
QLPEYARLTTLNELTEPDLPLSVHSGEWERARIAETLERTNGNKAKAARMLRISRGALYY
KMKQYGLD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtcaggagtaatggaagccgtgctgagcgtcctgctcggcgcgatgaatgac
gccgttaccgttattgacaacgagggaacggtactgtactggaatcgggtggcggaagag
acctacggaatcaacggcgccgatataatcggtcataaaataggagatttctttcagaga
gaatcgattatgctctttcaggtgatggacagcggcagcgcggtccatcaggtctatcat
gagccgcggccggggatgcatgtcatgatcagcgcggccccgatcacggatcaggcgggg
aagccgctcggcgccttgtctatcgagcgggatgtatcgtcctatgtgaaattgagcgcg
gagatgtatcatcatccggcaggccagccgctgctaccggccgtcttcccttccgccttg
cttcagcggctgcagaccgcattttccatcggacagccgctactgctcgcaggcgagggg
ggagtcggccgaacttcgatggccgagtggctccatcggagcgccagccgttccgggcgg
ttcgtgatggtcagctgcagcaccgttccggaagggatgctggaagccgaattattcggc
tatcagggaggagaagagcggccagggaagctggatctggcagccgacggcacgctctat
ctgagagatatcgacgcgcttcctccgtcgatgcaggagaagctggcggccatgctgcgc
ctgtcccgcttcgagcggctgggcggcacggcatccgtcccgctgcagtgccgaatctgc
ggctctgtcggtcccgaagccgccgcagaggagccggaccgcctgctgccttccttgcgg
tacgccttccagctctatacggttcctccgctgcgcgagcggaagcaggacctgccggag
ctgtgccgggtcttcctgcaccaggcggccgccaaggcaggcatcaccgctccggagctc
gcgcctgacgcgctggcggcggtatttgcctgcgattggccgggcaatctgtcgcagcta
aggaacgcgatggaatacgccgctgctgccgcggccggatccggcgcggtgacgtccgcc
cagctgccggaatatgcccgcttgaccaccttgaatgaattaaccgagccggatcttccc
ctcagcgtccattccggggaatgggagcgcgcccgcatcgccgagacgcttgagcgaacg
aacgggaacaaggccaaggcagcccggatgctgcggatatcccgcggcgcgctctactat
aaaatgaagcaatacggattggactag
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