Paenibacillus thiaminolyticus: NDS46_20880
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Entry
NDS46_20880 CDS
T08812
Name
(GenBank) LysR family transcriptional regulator
KO
K09681
LysR family transcriptional regulator, transcription activator of glutamate synthase operon
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pthi03000
]
NDS46_20880
Transcription factors [BR:
pthi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NDS46_20880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HVO_A0261_N
HTH_5
MarR
HTH_30
HTH_23
HTH_11
MarR_2
Motif
Other DBs
NCBI-ProteinID:
WCF06782
LinkDB
All DBs
Position
complement(4594313..4595263)
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AA seq
316 aa
AA seq
DB search
MELRQLLYFVKVAQKEHVTQAAEELHVAQSAVSRQIHQLEEELGVKLFLQKGRNLQLTPV
GQLFCSRAEAVLKDLERAVQEVQEFMHPELGEVRIGFPHSLGIHLIPKLVAEFRKRHPNV
KFRFKQGMYPSLIRDIVSGEVDLAFISPYPKDSDMVTGEIVLNEELLAILPPNHPLAREE
TISLKQLKEEMFVMFSPGYSLRPIVWDACMKAGFTPHIGFEGEETETIRGLVAAGMGVSL
LPDMALQHTSELQPARVRVIDPVVTRSIGLIRRIDEKLPLVAQTFHTFLLQYFREDEGGA
PKQGKPDSAQDELELL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtggaacttaggcaattgttgtacttcgtaaaggtggcccagaaggagcatgtgacgcag
gcagcggaggagcttcatgtcgcccagtcagccgtaagccggcagatccatcagctggag
gaggagctaggcgtcaagctgttcctgcagaaggggcgcaacctccagctgacgccggta
gggcagctgttctgcagccgggcggaagcggtgctgaaggatctggagcgcgcggtccag
gaggtgcaggaattcatgcatccggaactgggagaggtgcgaatcgggtttccgcacagc
ttggggatccatctgattccgaagctggtggccgagttccggaagcggcacccgaacgtg
aagttccggttcaagcagggcatgtacccgtccctcattcgggatatcgtatccggcgaa
gtcgatcttgccttcatctccccgtatccgaaggacagcgacatggtgaccggggagatt
gtgctgaacgaggagctgctcgccatccttccgccgaatcatccgctggcccgggaggag
acgatatcgctgaagcagttgaaggaagagatgttcgtcatgttcagtcccggatattca
ctgcggccgatcgtatgggatgcctgcatgaaggcaggcttcacgccgcatatcggcttc
gagggggaagagacggagacaattcgaggcctcgtggccgccggcatgggagtcagcctc
ctgccggatatggcgctccagcacacatcagagcttcagccggctcgcgtcagggtgatc
gatccggtggttacgcgctccatcgggctgattcgccgcatcgacgagaagctgccgttg
gtcgcgcagacctttcacacctttttgctgcaatatttcagagaggatgaaggcggcgcc
cccaagcaggggaagccggactcggcacaggatgagcttgagctgctgtag
DBGET
integrated database retrieval system
