Paenibacillus thiaminolyticus: NDS46_23360
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Entry
NDS46_23360 CDS
T08812
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pthi
Paenibacillus thiaminolyticus
Pathway
pthi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NDS46_23360 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pthi03019
]
NDS46_23360 (recQ)
03400 DNA repair and recombination proteins [BR:
pthi03400
]
NDS46_23360 (recQ)
Enzymes [BR:
pthi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NDS46_23360 (recQ)
Messenger RNA biogenesis [BR:
pthi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NDS46_23360 (recQ)
DNA repair and recombination proteins [BR:
pthi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NDS46_23360 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
DRE2_N
Motif
Other DBs
NCBI-ProteinID:
WCF07241
LinkDB
All DBs
Position
complement(5132945..5134774)
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AA seq
609 aa
AA seq
DB search
MISMDQARSTLKRVFGYDDFREGQKRIIEYILEGKNTVGIMPTGGGKSICYQIPALMLQG
VTLVVSPLISLMKDQVDALHSLGVEAAFINSTQEMGEAGRIVRRAEEGRLKLLYVAPERL
ESEWFRERAKSLPIAFIAVDEAHCVSQWGHDFRPSYRAIAPFLKELEEAGRPRPLMAAFT
ATATPEVTEDLIRLLELGEPELVVTGFKRDNLAFAVLRGEERRAFTLNYVRERTHQPGII
YASTRKEVEDLCEMLRKAGLAAGRYHAGMSDEERAHMQEAFLYDDLRVIVATNAFGMGID
KSNVRYVLHYNMPKHMEAYVQEAGRAGRDGEPSECVLLFHPQDILTQKFFIEQSEAAPER
KTHEYKKLQAMIDYCYTTGCLQTYMLRYFGEMSDETCGMCGNCKDERESIDITTEAQKIF
SCIFRMRERFGVSMVASVLKGSRNKKVVQYGFEKLPTHGEMRHLTEKAIADLIYVLIAEG
YLQLSEGQYPVVRLLPPAAEVLKGQRQVTQRVATSLKPKAAGAVDQTIFEQLRLIRRELA
SKAGVPPYIVFNDSTLREMAERMPTTEAEMMLVKGIGEAKLKQFGEPFMAFFRQREEESA
RLDAQEEWA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgatatcaatggaccaagcacggagcacattgaagcgggtgttcggctacgatgacttc
cgcgagggacagaagcgaataattgaatatatattggaaggtaaaaatacggtaggcatt
atgccgaccggcggcgggaagtcgatctgttaccagattccggcgctgatgctgcagggc
gtgacgctggtcgtctcgccgctcatctcgctgatgaaggatcaggtcgatgcgctgcac
agcttgggcgtggaggcggcgttcatcaacagcacccaggagatgggggaggcgggacga
attgtgcgccgggcggaggaagggcggctgaagctgctctatgtcgcgccggagcggctg
gagagcgaatggttccgtgagcgggcgaagtcgctgccgatcgcgttcattgcggtggac
gaggcccactgcgtgtcgcagtgggggcatgatttccgcccgagctaccgcgcgatcgcg
cctttcctgaaggagctggaggaggcgggacgtccgcgcccgctcatggcggcctttacg
gctaccgcgacgccggaggtgacggaggacttaatccggctgctcgagcttggggagccg
gaactggtggtcaccggcttcaagcgggacaacctggcgttcgccgtgctgcgcggcgag
gagcgccgggcgttcacgctgaattatgtgcgggaacgcacgcatcagcccggcatcatc
tatgcctcgacgcggaaggaagtcgaggatctgtgcgagatgctgcggaaggcgggtctt
gccgccggccggtatcatgccggcatgtcggacgaggagcgcgcgcatatgcaggaggcg
ttcctgtatgacgacctgcgcgtcatcgtggcgacgaacgccttcggcatgggcatcgac
aaatcgaacgtgcgctatgtgctgcactacaatatgccgaagcatatggaggcgtatgtg
caggaggccgggcgcgcgggccgggacggcgagccgagcgaatgcgtgctgctgttccat
ccgcaggatattttgacgcagaagttttttattgaacagagcgaagccgcgccagagcgg
aagacacatgaatataagaagctgcaggcgatgatcgattactgctacacgaccggctgc
ctgcagacgtacatgctgcgctacttcggcgaaatgtcggacgagacctgcggcatgtgc
gggaactgcaaggatgagcgcgaatcgatcgacattacgacggaagcgcagaaaattttc
tcctgcatcttccggatgcgggaacggttcggcgtctcgatggtagcctctgtgctgaag
ggatcgcgcaacaaaaaggtggtccaatacggcttcgagaagctgccgacgcatggagag
atgcggcatttgaccgagaaggcgatcgccgacctgatttatgtgctgatcgcggaaggc
tatttgcagttaagcgaaggacagtatccggtcgtccgcctgctgccgcccgcggccgag
gtgctgaaggggcagcgccaggtgacgcagcgggtcgcgacctcgctgaagccgaaggcc
gccggcgcggtcgaccagacgatcttcgagcagctccgcctgatccggcgcgagctggcg
agcaaggcgggcgtgccgccatatatcgtgttcaacgacagcacgctgcgggagatggcg
gagcggatgccgacgacggaagccgagatgatgctcgtcaaaggcatcggggaagcgaag
ctaaaacaattcggcgagccgttcatggccttcttccgtcaacgggaagaagagtcggcc
cggcttgacgcacaggaggaatgggcatga
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