Paenibacillus thiaminolyticus: NDS46_24100
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Entry
NDS46_24100 CDS
T08812
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pthi
Paenibacillus thiaminolyticus
Pathway
pthi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NDS46_24100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pthi03400
]
NDS46_24100
Enzymes [BR:
pthi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NDS46_24100
DNA repair and recombination proteins [BR:
pthi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NDS46_24100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
WCF07372
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All DBs
Position
complement(5291958..5293076)
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AA seq
372 aa
AA seq
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MLKIGSHVSFSEKGLLTATKEAISYGSSSFMIYTGAPQNTRRKPIDKLFIEEGKELMNKH
GIDEIVVHAPYIINLGSYKPATFELAVSFLQDEIHRTDCIGVNNIVLHPGAYTDKDAEYG
INRIAEGLNEVLRNTKETNVNIALETMAGKGTEIGRSFEEIAAIIDKVEDNGRLTVCLDT
CHIHDAGYDIVNDLDGVLEEFDRVVGLGRIAVVHINDSKNPTGAGKDRHAPIGAGYLGFD
AIRNVVQHEALLGRPFILETPWIGKDPKQQRPMYEAEIAFLRGDAKERFGEEFWADVERM
RHFFEKQDVDSRAFVLETWNVLKNDAKAKKADPREPMERLYDMIVDADLLPDRTEEEINQ
RITAWYTGQASE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagattggttctcatgtatccttttccgaaaaagggctgttgacggcgacgaag
gaagcgataagctatggctccagctcgttcatgatatataccggagcgcctcaaaatacg
cggcgcaaaccgatagacaagctgttcatcgaggaaggcaaggaattgatgaacaagcat
ggcatcgacgagatcgtggtccatgcgccttatattatcaatctcggatcgtacaagccc
gcgacgttcgaattggccgtatcatttctgcaggatgagattcaccgcacggattgcatc
ggcgtcaataatatcgtgcttcatccgggcgcctatacggacaaggatgccgaatatgga
attaaccgcattgcggagggcttgaatgaagtgctgcggaacacgaaggagacgaacgtg
aacatcgcgctggagacgatggcgggcaagggcaccgagattggccgcagcttcgaggag
atcgcggcgattatcgacaaggtcgaggataacggccgcctgactgtctgtctcgacacc
tgccacatccatgatgccggctatgatatcgtcaacgatctggatggtgtgctggaggag
ttcgaccgcgtagtcggacttggccgcatcgctgtcgttcatatcaatgatagcaaaaat
ccgaccggggcaggcaaagaccgccatgcgcctatcggggcgggctatctcggcttcgac
gcgattcgcaatgtcgtgcagcatgaagcgctgctcggcagaccgttcattctggagacg
ccatggatcggcaaagatccgaagcagcagcgcccgatgtacgaggcggagatcgcgttc
ctgcgcggcgatgccaaggagcgcttcggcgaagagttctgggcggacgtcgagcggatg
cgccacttcttcgagaagcaggatgtcgattctcgcgccttcgtgcttgagacgtggaat
gtgctcaaaaacgacgccaaggcgaagaaggccgatccgcgcgagccgatggagcggctg
tacgatatgatcgtcgatgcggacctgctgccggatcggactgaagaagagattaatcag
cgtattaccgcatggtatacgggacaagcttctgaatag
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