Paenibacillus thiaminolyticus: NDS46_24635
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Entry
NDS46_24635 CDS
T08812
Name
(GenBank) response regulator transcription factor
KO
K07693
two-component system, NarL family, response regulator DesR
Organism
pthi
Paenibacillus thiaminolyticus
Pathway
pthi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NDS46_24635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pthi02022
]
NDS46_24635
Two-component system [BR:
pthi02022
]
NarL family
DesK-DesR (membrane lipid fluidity regulation)
NDS46_24635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
DUF2089
DUF742
HTH_23
HTH_28
HTH_10
HTH_29
HTH_11
HTH_38
Glycos_transf_1
DUF7342
HTH_40
DUF6115
DUF7760
RdfA
Motif
Other DBs
NCBI-ProteinID:
WCF07466
LinkDB
All DBs
Position
complement(5411636..5412241)
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AA seq
201 aa
AA seq
DB search
MIRIVIAEDQRMLRGALASLLDLEDDIEVVGQAGDGDEALALIARLKPDVCLMDIEMPAK
SGLDVAEELKRQRLNCRVIILTTFGRPGYFERAVKAGVQGYLLKDEPSERLAAAIRSVMR
GEREISPELAFAVIRKEDNPLTEREREILKLAAEGRTANEIASALYLSYGTVRNYLSSIM
NKLEARTRIEAIETARSKGWL
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgataaggattgtgatcgctgaggatcagcgaatgctgcgcggcgcgctcgcatccctc
cttgatctggaggatgatattgaagtggttgggcaggccggcgacggggacgaagcgctg
gcgctgatcgcaaggctgaagccggatgtatgtctgatggatattgagatgccggccaag
agcggcctggatgtagccgaagagctgaagcgccagcgcttgaattgccgggttattatt
ttgacgacctttggccggccgggatatttcgagcgggccgtgaaagccggggttcaaggc
tatctgctgaaggacgagccgagcgagcggcttgccgcggcgatacgcagcgtgatgcgg
ggtgaacgggagatttcgccggagctcgcttttgccgttattcgtaaagaagataatccg
ctgaccgagcgggagcgtgagattttgaagcttgccgccgaagggcgcaccgcgaatgag
atcgcatcggcgctctatttatcttacggcaccgtgcgtaattacttgtccagcatcatg
aacaagctggaggcgaggacacgcatcgaggccatcgagaccgcaaggtcgaaaggttgg
ctataa
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