Paenibacillus thiaminolyticus: NDS46_24920
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Entry
NDS46_24920 CDS
T08812
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
pthi
Paenibacillus thiaminolyticus
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pthi03012
]
NDS46_24920 (abc-f)
Translation factors [BR:
pthi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
NDS46_24920 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
ABC_tran_CTD
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_23
AAA_22
AAA_16
MMR_HSR1
AAA_15
nSTAND3
AAA_14
Dynamin_N
NB-ARC
MeaB
NACHT
AAA_24
VapE-like_dom
AAA_25
DUF5568
AAA_33
DBL_C
Guanylate_kin
Motif
Other DBs
NCBI-ProteinID:
WCF07515
LinkDB
All DBs
Position
5474152..5476125
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AA seq
657 aa
AA seq
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MLLQVNGMSKSYGITPVLSNITLQILERERIGLVGVNGAGKSTLLQLIAGEMSPDSGTIY
KAKETRIGYLAQNSGLQSNRSIWDEMMLIFAPLVEAEQELRQLEHEIADPETAADSARHE
AVMRRYAERSEWFRMQGGYEMETRVRSILHGMGFSQMDPGTPIHTLSGGQKTRLALARIL
LQQPDLLLLDEPTNHLDIHTLTWLENYLRSYPGAVLVVSHDRYFLDAMVTTIIEIERHQA
KRYTGNYTKYMELKAAEYEQQMKLYEKQQDEIARLEDFVQRNLVRASTTKRAQSRRKTLE
KMERLDRPAGELKKAHFRFETTRQSGKDVLHVQQLSAGYDGAEPLFRHAEFDLKRGEMVA
LIGPNGIGKSTLLKVLIGKHPLRDGSCRWGTNVSIGYYDQEQSTLNPNHTVLEEVWSAYP
HLEEVRIRTVLGNFLFSGDDVTKKVASLSGGEKARVALAKLMLQQANVLILDEPTNHLDL
FSKEVLESALYDYEGTLLFISHDRYFLNKMAERIIELDADGTHLYLGNYDDYMTKKQELA
EDEAIRASLQPAAPSKPAAFQGSPAADCTADAGLSAAEAYEIDKQAKREERARQRKLEQL
ETQIAALEARIAERELELAEPDVYNDYVRVQAIQAQLDEDKEALNAVYAEWEQLMEA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttcaagtgaacggcatgagcaagagttacgggataactcccgtattgtcgaat
attacgctgcagattctggagcgcgagcggattgggctggtcggcgtcaacggggccggc
aaatcgacgctcctgcagctcatcgccggagaaatgtccccggacagcgggaccatttat
aaagccaaagaaacacgcatcggttacctggcccagaacagcggactgcaatcgaaccgc
tccatctgggatgagatgatgctcatattcgcgccattagtggaagcggaacaagagctg
cggcagctcgaacatgagattgcggacccggagaccgccgccgactccgcccgccatgaa
gcggtgatgcgcagatacgccgagcgctcggagtggttccgcatgcagggcgggtacgag
atggagacgcgggtgcggagcattcttcacgggatgggcttcagtcagatggatccgggt
acgcccatccatacgctaagcggcggccagaagacccggctggccttggcccgcattctg
ctgcagcagcccgatctgctgctgctggacgaaccgacgaaccatttggacatccatacg
ctgacctggctcgagaattatctccgctcctatccgggagcggtgctggtcgtgtctcac
gaccgttatttcctcgatgcgatggtcaccaccattatcgagatcgaacgccatcaggcg
aagcgctacaccggcaattatacgaagtatatggaattaaaagcggctgagtacgagcag
cagatgaagctgtatgagaagcagcaggacgagatcgcccggctggaggatttcgtccag
cgcaacctcgtgcgcgcttccacgacgaagcgggctcagagccggcgcaagacattggag
aagatggagcggctggacaggccggccggcgagctgaagaaggcgcatttccgcttcgag
acgacgaggcagagcggcaaggatgtgctgcatgtacagcagctctccgcgggttatgac
ggcgccgagccgttgttccgccatgcggaattcgatctgaagcgaggcgagatggtcgcc
cttatcggtccgaacggaatcggcaagtcgaccttgctgaaggtgctgattggcaagcat
ccccttcgcgacggaagctgccgctggggcaccaatgtctcgatcggctactatgatcaa
gaacaatcgacgctgaatccgaaccatacggtgctcgaagaggtgtggagcgcctatcct
catctggaggaggtgcggatacggaccgtattggggaacttcctgttcagcggggatgat
gtgactaagaaggtcgcttccctgagcggcggggaaaaagcgcgcgtcgccctggccaag
ctgatgctgcagcaggcgaacgtgctgattctcgacgagccgaccaaccatctcgatctg
ttcagcaaggaagtgctggaatcggcgctgtacgactatgaaggcacgctgctgttcatt
tcccatgaccgctacttcctgaacaagatggcggagcgcatcatcgagctggatgcggac
ggaacgcacctgtatctcggcaattatgacgactatatgaccaaaaagcaggagcttgcc
gaagacgaagcgattcgcgcctcgctgcagccggcggcgccaagcaagccggccgcgttc
cagggcagccccgcggcggactgtacggccgatgcgggcttgagcgcggcggaggcctat
gagatcgacaagcaggccaagcgcgaggagcgcgcgcgccagcggaagctggagcaattg
gagacgcagattgccgccctggaagcgagaatcgcggagcgcgagctggagcttgccgag
ccggacgtctataacgattatgtccgcgttcaagcgatccaggcgcagctcgatgaagac
aaggaagcgttgaacgcggtatacgccgaatgggagcagctgatggaagcctag
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