Paenibacillus thiaminolyticus: NDS46_26890
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Entry
NDS46_26890 CDS
T08812
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pthi
Paenibacillus thiaminolyticus
Pathway
pthi03420
Nucleotide excision repair
pthi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pthi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NDS46_26890 (pcrA)
03430 Mismatch repair
NDS46_26890 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pthi03400
]
NDS46_26890 (pcrA)
Enzymes [BR:
pthi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NDS46_26890 (pcrA)
DNA repair and recombination proteins [BR:
pthi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NDS46_26890 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NDS46_26890 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
DUF2067
GBS_Bsp-like
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
WCF07853
LinkDB
All DBs
Position
complement(5904180..5906555)
Genome browser
AA seq
791 aa
AA seq
DB search
MFEFLESSRPGVDLHESIARLNPEQRRAVEKMDGPLLIMAGAGSGKTRVLTHRIAYLISQ
RKAPPWAILAITFTNKAAREMQERVAKLVGSEGRDIWVSTFHSMCVRILRRDIERIGFTS
NFTILDSTDQLSVIRGCMKDLNLDTKKFEPRAIQAAISSAKNELLSPKRFEQNIGDYFQG
VVAKVYTKYQQRLKSNNALDFDDLIMTTIELFKEEPEVLDFYQNKFKYIHVDEYQDTNRA
QYMLCRMLADKHHNICVVGDSDQSIYRWRGADITNILNFEEDYPEATVIYLEQNYRSTAN
ILNAANNVINQNTGRKPKKLWTDQGEGQPIKLYQADSEHDEGYFVTGEINKNKANGKSYS
KHAILYRTNAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDILGYLRLISNPDDDISLE
RIINVPKRGIGATTMAKLAEAAAERGTSMMKVLDNMDGLDIAAKTKGALREFYAMIDSLN
RMVDYLSVTELTEKMLELSQYRLELQRENTLESKARLENIDEFLSVTQEFEQRNEDKSLV
AFLTDLALIADIDSMNDEPEEQDDAVILMTMHSAKGLEFPYVFIIGMEEGVFPHSRAFSD
NEELEEERRLAYVGITRAEEQLYLTCARSRTLFGRTNANPPSRFLREIPDELKEEVSPSG
ARYERFDRYGRSNSAASYGGRGLGYSGPASGASTGGFGSRTSRTGDAAGQRTAAASSKPG
GVTVTSSLDKAKQNGDSSSYQAGDKVAHAKWGTGVIVSVKGTGTDMELQIAFPAPVGVKR
LLAAFAPVTKV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatttttagaatcatcccgtcccggagtggatctccatgaatcgatagcgaga
ctaaatccggagcagcgccgcgcggttgaaaagatggacggcccgctgctcattatggcc
ggcgccggatccggcaagacgcgcgtgctgacgcaccgcatcgcctatctcatctcgcag
cgcaaggctccgccttgggccattctcgcgattacgttcacgaacaaggcggcccgcgag
atgcaggagcgggtcgcgaagctcgtcggctcagagggccgcgacatctgggtatcgaca
ttccactccatgtgcgtgcgcattctgcgccgggacattgagcgcatcggcttcacgtcg
aacttcaccatcctggactcgacggaccagctctcggtcatccggggctgcatgaaggac
ttgaacctcgataccaaaaaattcgagccccgcgctatccaggccgccatcagcagcgcg
aagaacgagctgctctcgccgaagcggttcgagcagaacatcggcgactacttccagggc
gtggtggcgaaggtgtatacgaagtaccagcagcggctcaagagcaacaacgcgcttgat
ttcgacgatctcatcatgaccacgatcgagctgttcaaggaagagccggaggtgctcgat
ttttatcagaacaaattcaaatatatccatgtcgacgagtaccaggatacgaaccgggcg
caatacatgctgtgccgcatgctggcggacaagcatcataatatttgcgtcgtgggggac
agcgaccagtcgatttaccgttggcgcggcgccgacattacgaatattttgaacttcgag
gaggactatccggaagcgacggttatctatctcgagcagaattaccgttcgaccgcgaat
attttgaatgccgccaacaatgtcatcaaccagaataccggccgcaaaccgaaaaagctg
tggaccgatcaaggggaagggcagccgatcaagctttaccaggctgactcggagcatgac
gaaggctacttcgtcaccggcgagatcaataagaataaagcgaacgggaaatcctacagc
aaacatgccattttataccggacgaacgcgcagtctcgggtaattgaggaaattctgatc
aaatccgatattccgtatcagatcgtcggcggcatcaagttctacgaccgcaaagagatc
aaagacattctcggctacctgcgtctgatctcgaatcccgacgatgatatcagcttggag
cgcattattaacgtgccgaagcggggcatcggcgcgacgacgatggccaagctggcggaa
gcggcggccgagcggggaacgtcgatgatgaaggtgctcgacaatatggacgggctcgac
atcgccgcgaagacgaagggcgcgctgcgcgagttctacgccatgatcgacagcttgaac
cggatggtggattatttgtcggtgacggaactgaccgagaagatgctggagttgtcccaa
taccggcttgagctccagcgggaaaatacattggaatccaaagcccgtctcgagaatatc
gacgagttcttgtcggtcacccaggagttcgagcagcggaatgaagacaagtcgctcgtc
gccttcttgaccgacctcgcgctgatcgcggacatcgactcgatgaacgacgagccggag
gagcaggatgatgcggtcattctgatgacgatgcacagcgccaaggggctggagttcccg
tacgtattcattatcgggatggaggaaggcgtcttcccgcacagccgggccttcagcgat
aacgaagagctagaggaggagcggcgtctggcgtatgtcggcattacgcgggccgaggag
cagctttacttgacctgtgcccgttcacgcacgctcttcggacggacgaatgcgaatccg
ccgtcccggttcctgcgggagattccggacgagctgaaggaggaggtgtcgccgtcaggc
gcgcgctacgagcgcttcgaccgctacggccgcagcaattccgcggcttcctacggcgga
cgaggactcggctatagcggccccgccagtggcgcctccacaggcggcttcggcagccgt
acaagccgtacaggcgatgcggccggccagcgtacagcagcggcttcttccaagccgggc
ggagtgacggtgacctcttcgctcgacaaggcgaagcagaacggcgattcgtcctcctat
caggccggagacaaggtcgcgcacgcgaagtggggtaccggcgtcatcgtatccgtcaaa
ggaacaggcacggacatggaactgcagatcgctttcccggccccggtcggcgtcaagcgt
ctgctggccgcattcgccccggtaaccaaggtataa
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integrated database retrieval system
