Paenibacillus thiaminolyticus: NDS46_31210
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Entry
NDS46_31210 CDS
T08812
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
pthi
Paenibacillus thiaminolyticus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
Nlig-Ia
PTCB-BRCT
HHH_5
DNA_ligase_ZBD
RUBY_RBDX
DUF2116
Motif
Other DBs
NCBI-ProteinID:
WCF11428
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Position
punnamedSY20:complement(235095..237083)
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AA seq
662 aa
AA seq
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MDKVQAKERIKYLRGSIKKHDELYDQNKPIISDGEYDTLYYELLDLEKQYPEFFDPDSPT
QRIYTTMVDELEKVRHSTFMGSQEKVKNWEGVLSFEKRYESPILAQPKLDGLTIVLSYDN
GILFQGITRGDGEVGQNIIHTVRTIQNLPSIIPFKGRLEVRMEGIIPFTEFERINVDGAY
SNPRNLVSGTLSQLNAKIAEERNVQGIVFDIISIEGMTFTSISEELEFLKAQGFTTVDSV
LFEQTEAGLSALKLYIENMEQNVRKSLPYMIDGLVLKFDKLSAKEELGSTSKHPRWSVAY
KFASLEATTRIKGVEHSVGRTGQITPVALLEKVDIDGVNVGRASLANYGTVEEKDIRIGD
RVFVIRANDVIPKVEASIKEVRNGSEEVILAPKHCPVCGAPTEFDGANLFCRGKQCKPQI
QGKIEHFASRKALNINSLGKSTVELFLEKGIICEVLDLYDLQEKEEEICALDGYGKKSFM
KLQKELERVKTEPLHKVLISLSIERLGETKSKDLSKVFTDMDALLSATEDPENFRTLLLK
IPDFGNTIADSVITFFTNEENRNMLLKMKEIGFTMKSDFESRDDNNLTLAGETVVVTGTL
NSMDRDAAKTKLEEMGAKVSSSISKKTSFVVVGEGKSKHAKAIELGVRVVFEEEFLQMIQ
AN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtacaagcaaaagaacggattaagtatcttcgtgggtctattaaaaaacat
gatgagctttatgaccagaacaaaccaattatcagtgatggcgaatacgacactttgtat
tatgagttactcgatttggaaaagcaatatcctgaattctttgaccccgattcaccgaca
cagcgcatatatacaactatggtcgatgaattggaaaaggtacgtcatagcacctttatg
ggttcacaggaaaaagtgaaaaattgggaaggtgttttatcttttgaaaaacggtatgaa
agcccaatattagctcaacccaaacttgatgggttgactatagttttatcctacgataat
ggaatcctttttcaaggaattacaagaggtgatggagaggttggacaaaacattattcat
accgttagaaccattcaaaacctcccttctattatcccgtttaaaggccgcctagaagtt
cgaatggaaggcattattccgttcactgagtttgaacggatcaatgttgatggtgcatac
tccaatcctcgaaacttggtaagcggcactctgagtcagctcaatgccaagatcgctgaa
gaaagaaatgttcaggggattgtatttgacattattagtattgaaggaatgacattcact
tctattagtgaagagctagaatttttgaaagcacaaggctttacgactgttgattctgtt
ctttttgaacagactgaagcgggactttccgcactaaaattgtacattgaaaacatggag
caaaatgttcgcaagagccttccatatatgattgatggactggttctgaagtttgataaa
ctttcggctaaagaagaacttggcagcacctcaaaacatccacgctggagtgttgcctat
aaatttgcttcattagaagccactacaagaattaaaggagtagaacattccgttggaaga
acaggacaaatcacacctgtagctcttcttgaaaaggttgatatcgatggcgtgaatgtt
gggcgagcttccctcgctaattatggcacggtagaggaaaaagacattcgcatcggtgat
agagtatttgttataagagctaatgatgtaattccaaaagtagaagcatcaatcaaagaa
gtacgcaatggaagtgaggaagtcatcttagctccaaaacactgtccggtgtgtggtgct
cctacagaattcgatggtgcaaatctattctgtcgaggaaagcaatgcaagccgcagatt
caaggaaaaatcgaacattttgcaagcagaaaagccctcaatattaatagcctgggtaaa
agcaccgtcgagctttttcttgaaaagggaattatttgtgaagtcttggatttgtacgac
ctacaggaaaaggaagaagaaatttgtgcgttggatggttacggaaaaaaatcgttcatg
aaattacaaaaagagcttgaacgtgtcaaaacagaacccctgcacaaggtgttgatttcc
ctgtcaattgaacgtcttggtgaaacgaaatccaaggacttatcgaaagtatttactgat
atggacgcacttttatccgctactgaggacccagaaaacttccgtactttgttgctcaaa
attcctgatttcggcaataccattgctgacagcgttattaccttctttacaaatgaagaa
aaccgcaacatgcttctcaagatgaaagaaattggatttactatgaaaagcgattttgag
tcaagggacgataataaccttacccttgcaggagaaaccgttgttgtaacaggaactctt
aactccatggatcgtgacgctgcaaaaacaaagcttgaagaaatgggggcaaaagtctct
agctcaataagtaagaaaacatcctttgttgtagttggggaaggaaaatcaaagcacgct
aaggcaattgagctaggcgttagagttgtatttgaagaagaattcctacaaatgattcag
gcaaattag
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