Piezobacter thermophilus: JCM14636_01480
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Entry
JCM14636_01480 CDS
T12098
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pthr Piezobacter thermophilus
Pathway
pthr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pthr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JCM14636_01480 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pthr03021
]
JCM14636_01480 (rho)
03019 Messenger RNA biogenesis [BR:
pthr03019
]
JCM14636_01480 (rho)
Transcription machinery [BR:
pthr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JCM14636_01480 (rho)
Messenger RNA biogenesis [BR:
pthr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JCM14636_01480 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
OB_RNB
AAA_25
NACHT
Fungal_virus_P2_C
AAA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BGR13373
LinkDB
All DBs
Position
158481..159752
Genome browser
AA seq
423 aa
AA seq
DB search
MTQQSLNLSDLKAKSPKDLLSMAEELEIENASTMRKGDMMFQILRERAEEGWEIGGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRQYSLRTGDTVSGPMKAPEDNERYFALTG
VRKINFEDPERARHKIAFDNLTPLYPDERLKMEIEDPTIKDKSARVIDLVSPIGKGQRCL
IVAPPRTGKTVILQNIAHSIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
ASRHVAVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKIADKRVF
PAIDILKSGTRKEDLLVNPKDLQKMYVLRRILNPMGTTDAIEFLLSKLKQTKTNAEFFDS
MNA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcaaagcctgaatctgtccgacctcaaggcgaaaagccccaaggacctgctc
tccatggccgaggagctcgagatcgagaacgcctcgaccatgcgcaagggcgacatgatg
ttccagatcctgcgcgaacgcgcggaagaaggatgggaaatcggcggcgacggcgtgctg
gaggtgctccaggacgggttcggcttcctgcgctcgcccgaggccaactatctgccggga
ccggacgacatctatgtctcgcccgacatgatccgccagtattccctgcgcacgggcgac
acggtgtcggggccgatgaaggcgcccgaggacaacgagcgctatttcgcgctgaccggg
gtgcgaaagatcaatttcgaggatcccgagcgcgcgcgccacaagatcgccttcgacaac
ctcacgccgctttaccccgacgagcgcctgaagatggagatcgaggatcccaccatcaag
gacaagtcggcccgcgtgatcgacctggtgtcgccgatcgggaaggggcagcgctgcctg
atcgtggcgccgccgcgcaccggcaagacggtgatcctgcagaacatcgcccattcgatc
gagaaaaatcaccccgaatgctatttgatcgtcctgctgatcgacgagcgccccgaggaa
gtcacggacatgcagcgctcggtgaagggcgaggtggtctcctcgaccttcgacgagccg
gcctcgcgccatgtggccgtggcggaaatggtgatcgagaaggccaagcgcttggtcgaa
cacaaacgagatgttgtgatacttctcgattcgatcacaagacttggtagagcttacaat
acagttgttccgtcttcgggcaaggttctgaccggcggcgtggatgcgaatgcgctgcaa
cggcccaaacgcttcttcggagcggcgcgcaatatcgaggagggaggctcgctgaccatc
atcgccacggcgctgatcgacaccggcagccgcatggacgaggtgatcttcgaagagttc
aagggcaccggcaactccgagatcgtcctggatcgaaagattgccgacaagcgggtcttc
ccggccatcgacatcctcaaatccggcacccggaaagaggatcttctggtcaatccgaag
gatctgcagaagatgtatgtgctgcgccggatcctcaacccgatgggtacgacggatgcg
atcgagttcctgctgtccaagctgaaacagaccaagaccaacgccgagttcttcgactcc
atgaacgcctga
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