Pseudomonas thivervalensis: CE140_00845
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Entry
CE140_00845 CDS
T11089
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pthv Pseudomonas thivervalensis
Pathway
pthv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pthv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CE140_00845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pthv03021
]
CE140_00845
Transcription machinery [BR:
pthv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CE140_00845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
HTH_24
HTH_11
PhyR_sigma-like
HTH_20
HTH_40
HTH_36
HTH_29
TetR_N
HTH_38
DUF1804
HTH_Tnp_4
HTH_28
HTH_10
HAC6_helical
Motif
Other DBs
NCBI-ProteinID:
AXA52958
UniProt:
A0A2Z4ZM82
LinkDB
All DBs
Position
197894..198415
Genome browser
AA seq
173 aa
AA seq
DB search
MPANDLSLRSAVDVLYSDHHSWLQGWLRKRLGNAFDAADLTQDTFVRVIKARTALDIREP
RPYLSMIAKGLLIDLFRRRSLEQSYLEALAAMPQEQHPSLEEQAILLQALMEIDRLLLGL
GPRVRQAFILSQFDGLTYPQIAERLGVSVRTVNNHMAKAMEHCCLMQIQLQLS
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaacgatctgtccctacgcagtgctgtcgacgttctgtacagtgatcatcac
agttggctccagggctggctgcgcaagcgcttgggcaatgccttcgatgcggctgacctg
acccaggatacgtttgtgcgggtcatcaaggcgcgcacggcgctggatatccgcgagccg
cgaccgtacctgtcgatgatcgccaaagggttgttgatcgacctgtttcgccgccgctcg
ctggaacaatcctacctcgaagccctggccgccatgccgcaagagcagcatccatcgctg
gaagagcaggcaatcctgctccaggcgctgatggagatcgaccgtctgctcctggggttg
gggccgcgcgtccggcaagcgttcatcctgtcgcagttcgatggcctgacctacccgcaa
attgccgagcgcctgggcgtcagcgtccgcacggtcaacaaccacatggccaaggccatg
gaacattgctgcctgatgcaaattcaattgcagctttcatga
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integrated database retrieval system