Pseudomonas thivervalensis: CE140_10040
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Entry
CE140_10040 CDS
T11089
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pthv Pseudomonas thivervalensis
Pathway
pthv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pthv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CE140_10040 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pthv03400
]
CE140_10040 (xth)
Enzymes [BR:
pthv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CE140_10040 (xth)
DNA repair and recombination proteins [BR:
pthv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CE140_10040 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
BstA_C
Motif
Other DBs
NCBI-ProteinID:
AXA54683
UniProt:
A0A176NGE9
LinkDB
All DBs
Position
complement(2335424..2336218)
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AA seq
264 aa
AA seq
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MKNLRIATFNINGIRARLPNLLEWLEREKPDIVCLQELKAADKDFPAAELESVGYGAIWH
GQASWNGVAILARDAQPLESRRGLPGGDDDSHSRYLEAAVHGVLVGCLYLPNGNPQPGPK
FDYKLAWFERLIEYAQGLQASDHPVVLAGDYNVVPTDDDIYNPRSWLKDALLQPESRACY
QRLLDQGWTDSLRHLYPDERIYTFWDYFRQHWQKNSGLRIDHLLLNPAASAYLSEAGVDA
WVRNQPHPSDHAPTWIRLASRKRR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctgcggattgcgaccttcaacatcaatggcatccgggcccggctgcccaac
ctgctggaatggctggagcgggagaaacccgacattgtctgtttgcaggaactcaaggcc
gcagataaggacttcccggcggcggagttggagtcggtggggtatggggcgatctggcac
gggcaggcatcgtggaacggtgtcgcgatcctggcccgtgatgcgcaaccattggagagc
cgtcgaggcctgccgggtggggatgacgacagccacagtcgctatctggaagcagcggtg
cacggcgtgctggtggggtgtctttacctgcccaacggcaatccgcaacccggtccaaaa
ttcgactacaagctggcctggttcgaacgcctgatcgaatacgcccaagggttgcaggcc
agtgatcatcccgtggtgctggccggtgactacaatgtggtgcccaccgacgacgacatc
tacaacccgcgctcctggctcaaggatgcgctattgcagcccgaaagccgtgcctgctac
cagcgcttgctggaccagggctggaccgactcgttgcgccacttgtatccagacgagcgg
atctacaccttctgggattatttccgccagcactggcaaaagaactccggactgcgcatc
gatcacctgttgctcaacccggccgccagcgcctacctgagcgaggctggcgtggacgcc
tgggtcaggaaccagccccaccccagcgaccatgcacccacctggatccgactggcttcg
cgcaaacggcgctga
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