Pseudomonas thivervalensis: CE140_15175
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Entry
CE140_15175 CDS
T11089
Name
(GenBank) RNase adaptor protein RapZ
KO
K06958
RNase adapter protein RapZ
Organism
pthv Pseudomonas thivervalensis
Brite
KEGG Orthology (KO) [BR:
pthv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pthv03019
]
CE140_15175
Messenger RNA biogenesis [BR:
pthv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CE140_15175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
AAA_28
CoaE
AAA_29
T2SSE
RsgA_GTPase
FtsK_SpoIIIE
SKI
nSTAND_NTPase5
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AXA55649
LinkDB
All DBs
Position
3451796..3452653
Genome browser
AA seq
285 aa
AA seq
DB search
MRMIIVSGRSGSGKSTALNVLEDSGYYCIDNLPAGLLPELAERALIHTELAQPLVAVSID
ARNLPSHLSRFPELLEEVRSRHIQCDVLYLDADEETLLKRFSETRRRHPLSNANRSLAEA
IEDESQLLGPIADLADLKVNTTHLNLYQLRDTIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRAQSGLDQPVIDYLAAQPDVEEMYQDISSYLLKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQLLQQSLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgattatcgtcagtggccgctccggctccggtaaaagcacggccctcaacgtg
cttgaggacagcggctactattgcatcgataatttgcccgccggcctgttaccggaactg
gccgagcgcgccctgatccacaccgagctggcgcagccgctggtggcggtgtccatcgac
gcgcgtaacctgccgagccacctgtcgcgctttcctgaactgctcgaggaagtgcgcagc
cgccatatccaatgcgacgtgctgtacctggatgccgatgaagagacgctgctcaagcgt
ttttccgaaacccgtcggcgtcacccgctgagcaacgccaaccgctccctggccgaagcc
atcgaggatgaaagccagttgctggggccgattgccgacctggccgacctgaaggtcaac
accacgcacctgaacctgtatcagttgcgcgacacgatcaagctgcgcctgctgaaccag
ccggaaccgggcacggcgttcctggtggagtcgttcggtttcaaacgtggcatgccagta
gacgccgacctggtgttcgacgtgcgctgcctgcccaacccgtattggaagccggaattg
cgcgcgcagtccgggctcgaccaaccggtgatcgattacctggccgcacagcccgatgtc
gaggaaatgtaccaggacatctccagctacctgctcaaatggctaccccgctttgccgcg
agtaatcgcgcctacgtcacgattgccataggttgtaccggcggccatcaccgctccgtc
tacctgaccgaacgcctgggtcagctcctgcaacaatccctgaagaacgtccaggttcgc
caccgcgacctcagctaa
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