Pseudomonas thivervalensis: CE140_15520
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Entry
CE140_15520 CDS
T11089
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pthv Pseudomonas thivervalensis
Pathway
pthv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pthv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE140_15520 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pthv03019
]
CE140_15520 (pnp)
03016 Transfer RNA biogenesis [BR:
pthv03016
]
CE140_15520 (pnp)
Enzymes [BR:
pthv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CE140_15520 (pnp)
Messenger RNA biogenesis [BR:
pthv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CE140_15520 (pnp)
Transfer RNA biogenesis [BR:
pthv03016
]
Prokaryotic type
tRNA degradation factors
CE140_15520 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
TraK_C
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
AXA55717
UniProt:
A0A176NNZ7
LinkDB
All DBs
Position
complement(3536988..3539093)
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWTWAPQPEA
TELLGAIRAEFGDAISQAYTITIKADRYARLGELKDQVVAKFSGEEGQPSASDVKAAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaaaaaattccagttcggtcagtcgaccgttaccctcgagactggc
cgtatcgcccgtcaggcctccggcgcagtgctggtcaccgttgacgacgacgtcagcgta
ttggtgaccgttgtcggtgccaagcaagccgatccaggcaagggcttcttccctctgtct
gttcactaccaggaaaaaacttacgctgccggtaagatccctggcggtttcttcaagcgc
gaaggccgtccttccgagaaagaaaccctgacttcccgactgatcgaccgtccgatccgt
ccgctgttcccggaaggcttcatgaacgaagtgcaggttgtctgcaccgtcgtgtccacc
agcaagaaaaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tccggcattcctttcgatggcccgatcggcgctgcccgcgtcgcgttccacgaaagcacc
ggctacctgctgaacccgacctacgagcagttgaaggcttcgagcctggacatggtcgtg
gccggtacttccgaagccgtgctgatggttgaatccgaagccaaagagctgaccgaagac
cagatgctgggcgccgtgctgttcgcccacgacgagttccaggtggtgatcaacgccgtc
aaggaactggccgccgaagccgccaagccaacctggacctgggctccacagccagaagcc
accgaactgctgggcgcgatccgtgccgagttcggcgacgcgatctcccaggcctacacc
atcaccatcaaggccgaccgctacgcgcgtctgggtgagctgaaagaccaggtcgttgcc
aagttctccggcgaagaaggccagccatcggccagcgacgtcaaggccgctttcggtgaa
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccgcgtatcgatggtcgc
gacacccgcaccgtacgtccgctgaacatcgaagtcggcgttctgccgaagacccacggt
tcggcactgttcacccgtggcgaaacccaggcgctggtcgttgcaacactgggcaccgcc
cgtgacgcgcaactgctggacaccctggaaggcgaaaagaaagacccgttcatgctgcac
tacaacttccctccgttctcggtaggcgagtgtggtcgcatgggtggcgccggtcgccgc
gaaatcggtcacggccgtctggcccgtcgttcggtccaggccatgctgccagccgctgac
gtgttcccgtacaccattcgcgtggtatcggaaatcaccgaatccaacggttcgagctcg
atggcttcggtctgcggcgcttccctggccctgatggacgccggtgtgccgatgaaggca
ccggttgccggtatcgccatgggcctggttaaagaaggcgagaaattcgccgtcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtggccggtaccgcc
aagggcgtcaccgcactgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gaaatcgccctgggccaggccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcatcggtcagtcccgtaccgagctgtcggaaaatgctccgaccatgatcgcgatgaaa
atcgacaccgacaaaatccgtgatgtcatcggtaaaggcggcgcgaccatccgtgcgatc
tgcgaagaaaccaaggcttcgatcgacatcgaagacgacggttcgatcaagatcttcggc
gagaccaaggaagcggcagaagcggcacgccagcgcgtcctggggatcaccgcagaagcc
gagatcggcaagatctacgtcggcaaggttgagcgcatcgtcgacttcggcgcgttcgtc
aacatcctgccgggcaaggatggtctggttcacatctccatgctgagcgatgctcgcgtc
gagaaagtgaccgacatcctgaaggaaggccaggaagtggaagtgctggtactggacgtg
gacaaccgcggccgtatcaagctgtccatcaaggacgtcgcagcagccaaggcatcgggc
gtttaa
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