Pseudomonas thivervalensis: CE140_15530
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Entry
CE140_15530 CDS
T11089
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pthv Pseudomonas thivervalensis
Brite
KEGG Orthology (KO) [BR:
pthv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pthv03016
]
CE140_15530
Enzymes [BR:
pthv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CE140_15530
Transfer RNA biogenesis [BR:
pthv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CE140_15530
Prokaryotic type
CE140_15530
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AXA55719
UniProt:
A0A176NPG3
LinkDB
All DBs
Position
complement(3539701..3540618)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLLERPVTVGQADVEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFDGNTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaatgtcagcggtatcatcctgctcgacaagccg
ctggggttcacgtccaacgcggcgttgcagaaggttcgctggctgctcaatgccgagaag
gccgggcacaccggtagcctcgatccgctggccaccggcgtgctgccgctgtgctttggc
gaggcgaccaagttctcccagtatctgctcgattccgacaagggttatgaaaccctggcg
caactgggcaagaccaccaccacggcggatgccgaaggtgaggttttgctggagcgtccg
gtgaccgttggtcaggcggatgtcgaagcggtgttgccgaaatttcgtgggcaaatcagc
cagataccgccgatgtactccgctttgaagcgcgatgggcagccgttgtataaactggcc
cgtgcaggcgaagtagtggagcgtgaaccgcgttctgttactattgcgcgcttggaattg
ctggcctttgacggtaatactgcgcggcttgccgtggattgcagcaaaggcacctatatc
cgcaccttggtggaggatattggtgagcagctcggctgtggcgcgtacgtggcagaattg
cgacggacccaggccgggcctttcaccttggcccagacggtcacgctggaagagctggaa
gcggtgcatgccgaaggcggcaacgaagcggtcgaccgtttcctgatgccatcggacagc
ggcttgcttgactggccactgctgcagttctccgaacacagcgcgttctactggctcaat
ggccagccagtacgtgccccggatgcgccgaagttcggcatggtccgggtgcaggatcac
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcattgcgccgcgtcga
ctgattcggtcggaatga
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