Pseudomonas thivervalensis: CE140_22225
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Entry
CE140_22225 CDS
T11089
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pthv Pseudomonas thivervalensis
Pathway
pthv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pthv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CE140_22225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pthv03019
]
CE140_22225
03009 Ribosome biogenesis [BR:
pthv03009
]
CE140_22225
03036 Chromosome and associated proteins [BR:
pthv03036
]
CE140_22225
Enzymes [BR:
pthv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CE140_22225
Messenger RNA biogenesis [BR:
pthv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CE140_22225
Ribosome biogenesis [BR:
pthv03009
]
Eukaryotic type
90S particles
RNase
CE140_22225
Prokaryotic type
rRNA processing factors
CE140_22225
Chromosome and associated proteins [BR:
pthv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CE140_22225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AXA56969
UniProt:
A0A176NRD5
LinkDB
All DBs
Position
complement(5041595..5042284)
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AA seq
229 aa
AA seq
DB search
MSASLSRLERQLGYTFKDPDLMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
LAREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDSGMEMARERVLAWLTSEIDSLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcttctctaagccgtctcgagcgtcagctcggctacactttcaaggacccggac
ctgatgctcctggccctcactcaccgcagttttgccgggcgcaacaacgaacgcctggag
tttctcggtgacgccatcctcaacttcgtcgctggcgaggcgctgttcgagcgcttcccg
ctggcccgcgaaggccagttgtcgcgtttgcgtgcacgattggtaaaaggtgagaccctg
gcggtactggcccgtggtttcgacctgggcgattacctgcgcctgggctccggtgagttg
aaaagcggtggtttccgtcgcgagtcgatcctggccgatgccctggaagcgttgattggc
gcgatctacctggattcgggcatggaaatggcgcgcgaacgcgtgctggcctggctgact
tccgagatcgacagcctgacgctggtggacaccaacaaggatccgaagacccgtttgcag
gaattcctgcaatcgcgcagttgcgaactgccgcgctacgaagtggtggatatccagggc
gagccgcattgccgaaccttcttcgtcgaatgcgaagttgtcctattgaatgaaaaaagc
cggggtcagggtgtgagtcgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggcgtggagaatggcaatgactga
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integrated database retrieval system