KEGG   Pseudomonas thivervalensis: CE140_22225
Entry
CE140_22225       CDS       T11089                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pthv  Pseudomonas thivervalensis
Pathway
pthv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pthv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CE140_22225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pthv03019]
    CE140_22225
   03009 Ribosome biogenesis [BR:pthv03009]
    CE140_22225
   03036 Chromosome and associated proteins [BR:pthv03036]
    CE140_22225
Enzymes [BR:pthv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CE140_22225
Messenger RNA biogenesis [BR:pthv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CE140_22225
Ribosome biogenesis [BR:pthv03009]
 Eukaryotic type
  90S particles
   RNase
    CE140_22225
 Prokaryotic type
  rRNA processing factors
   CE140_22225
Chromosome and associated proteins [BR:pthv03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CE140_22225
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: AXA56969
UniProt: A0A176NRD5
LinkDB
Position
complement(5041595..5042284)
AA seq 229 aa
MSASLSRLERQLGYTFKDPDLMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
LAREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDSGMEMARERVLAWLTSEIDSLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcgcttctctaagccgtctcgagcgtcagctcggctacactttcaaggacccggac
ctgatgctcctggccctcactcaccgcagttttgccgggcgcaacaacgaacgcctggag
tttctcggtgacgccatcctcaacttcgtcgctggcgaggcgctgttcgagcgcttcccg
ctggcccgcgaaggccagttgtcgcgtttgcgtgcacgattggtaaaaggtgagaccctg
gcggtactggcccgtggtttcgacctgggcgattacctgcgcctgggctccggtgagttg
aaaagcggtggtttccgtcgcgagtcgatcctggccgatgccctggaagcgttgattggc
gcgatctacctggattcgggcatggaaatggcgcgcgaacgcgtgctggcctggctgact
tccgagatcgacagcctgacgctggtggacaccaacaaggatccgaagacccgtttgcag
gaattcctgcaatcgcgcagttgcgaactgccgcgctacgaagtggtggatatccagggc
gagccgcattgccgaaccttcttcgtcgaatgcgaagttgtcctattgaatgaaaaaagc
cggggtcagggtgtgagtcgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggcgtggagaatggcaatgactga

DBGET integrated database retrieval system