Pseudomonas thivervalensis: CE140_22955
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Entry
CE140_22955 CDS
T11089
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pthv Pseudomonas thivervalensis
Pathway
pthv00260
Glycine, serine and threonine metabolism
pthv00460
Cyanoamino acid metabolism
pthv00630
Glyoxylate and dicarboxylate metabolism
pthv00670
One carbon pool by folate
pthv00680
Methane metabolism
pthv01100
Metabolic pathways
pthv01110
Biosynthesis of secondary metabolites
pthv01120
Microbial metabolism in diverse environments
pthv01200
Carbon metabolism
pthv01230
Biosynthesis of amino acids
pthv01240
Biosynthesis of cofactors
pthv04981
Folate transport and metabolism
Module
pthv_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pthv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CE140_22955 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CE140_22955 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CE140_22955 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CE140_22955 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CE140_22955 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CE140_22955 (glyA)
Enzymes [BR:
pthv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CE140_22955 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AXA57104
UniProt:
A0A176NQM1
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All DBs
Position
5200848..5202086
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AA seq
412 aa
AA seq
DB search
MSLQNFDPTIARLIDRERNRQETHLELIASENYVSEEVLQAQGSVLTNKYAEGYPGKRYY
GGCKVVDEIENLAIERARKLFNCEYVNVQPHSGSQANQAVFLAVLEPGDTILGMSLAHGG
HLTHGASVNFSGKIYRAFSYGLDTETETLDYEEMEALAREHRPKMIIAGASAYSRTIDFQ
RFRKICDEIGAYLMVDMAHYAGLIAAGVYPSPVGIADFITSTTHKTLRGPRGGLILAKAQ
YAALLDKTIFPVYQGGPLMHVIAAKAVAFNEALGDGFKHYQQRVIDNARVMADVLTRRGL
RVVSGGTDCHMFLLDLRSMNITGKDAEALLESAHITLNKNAIPNDPQKPAITSGIRIGTP
ALTTRGFGEAECAEVANLIADLLEQPDNAARLDNTRRRVMHLCECFPVYLLR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcaaaatttcgaccccaccatcgcccgcctgatcgaccgcgagcgcaaccgc
caggaaacccacctggaactgatcgcttcggaaaactacgtcagtgaagaagtgctccag
gcccagggctccgtgctcaccaacaagtacgccgaaggctatccgggcaagcgttactac
ggcggttgcaaggtcgtcgacgaaatcgagaacctggccatcgagcgggcgcgcaagctg
ttcaactgcgaatatgtcaacgtgcagccgcattccggctcccaggccaaccaggcggtt
ttcctggcggtgcttgaacccggcgacacgatcctgggcatgtccctggcccacggcggc
cacctgacccacggcgcctcggtgaatttttccggcaaaatctaccgggccttttcctat
ggcctggacaccgaaaccgaaaccctcgactacgaagaaatggaagccctggcccgggaa
caccggccgaagatgatcattgccggggcctcggcctattcgcggaccatcgacttccag
cgctttcgcaagatctgcgatgaaatcggcgcgtacctgatggtggacatggcgcactac
gccgggttgatcgctgccggcgtgtacccctcgccggtgggcatcgccgacttcatcacc
tccaccacccacaagaccctgcgcggcccccgcggcggcctgatcctggccaaggcgcaa
tacgccgccctgctcgacaagacgattttcccggtgtaccagggcggtccgctgatgcat
gtcatcgccgccaaggccgtggccttcaacgaagcgttgggcgacgggttcaagcattac
cagcagcgggtaatcgacaacgcccgggtcatggccgacgtcctgacccgacgcggcttg
cgggtggtgtccggcggtaccgactgccacatgttcctgctcgacctgcgctcgatgaac
atcaccggcaaggacgccgaggcactgctggaaagtgcccacatcaccctgaacaaaaac
gcgatccccaatgacccgcaaaaaccggcgatcaccagcggcattcgcatcggcaccccg
gcgctgaccacacgcggcttcggtgaagcggaatgtgccgaagtggcgaacctgatcgcc
gacctgctggaacagccggacaacgccgcacgcctggataacacccggcgccgggtgatg
catttgtgcgaatgctttccggtgtacctgctgaggtaa
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