Pseudomonas thivervalensis: CE140_24000
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Entry
CE140_24000 CDS
T11089
Name
(GenBank) GGDEF domain-containing protein
Organism
pthv Pseudomonas thivervalensis
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_3
PAS_8
dCache_1
SEO_C
MyTH4
Motif
Other DBs
NCBI-ProteinID:
AXA57290
UniProt:
A0A176NQK4
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All DBs
Position
5411306..5415154
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AA seq
1282 aa
AA seq
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MSNATSPLSNRAPAVVPGSPLRGTLKGALATLVLLLLGLLFWQLLDQLRETQQQQRQYTI
DYTADLAAQVSLNMALNAQIALNLLPIVEQPQTADEQQALVRKLQQSLPELRSLALLSPS
GRVLSDSDANSHDADYLGELVRRSRAQAHYFSNAEDGSVVHLLLHQASGSGRGYWALRLT
PNFFATLTKQADVGLRPLWLVENRLNQQIISRDESLPSISPAHLSPDDLENTVLTVPLSS
SDWQLRGLFDRRQVIEQLLPAFIGKCLLGLAFSLLPVIALLNMRRRQRQLHEGRRRYQDI
FEGTGVALCVLDLSGLKAFFERAGLHTGDQLRTWLQTTHQLEQLRQEVHVTEVNQMALKL
LNVDSCDQAWQLLVGKGAQDNNPVGSKLLEALLDQHKQLELEIKLQDAHGRDQHLWLVLR
LPEKQHDCNAVILSISDITSRKLIELSLLEREGFWSDVVRTVPDHLYVQDVISQRMIFSN
HHLGQTLGYDRTELHQMGEYFWEILLHSDDADHYHNLRQEQRRGGYTQLLQCQLRFRHRN
GKWRCFDIREQALARDRHNQVTRIIGVAKDVTEQIEASESLRDSEQRYRMLAESISDVIF
STDSKLSLNYVSPSVQAVLGYTADWIFQNGWQSIIANPQQLTGIYSLMDRVSKALDKPGQ
LAELRNQMQTQLFLFDCLRADGRKIPIELRLVLVWDEHGAFEGVLGVGRDISQQRRAEKD
LRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSQVLDQLPNMLTVDDQQEAHL
RYVLKQLQQHSTWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASE
QRIHRLAYYDALTHLPNRTLFQDRLHTALQSAERQKTWVVLMFLDLDRFKPINDSLGHAA
GDRMLKEMATRLLGCVADDDTVARMGGDEFTLLLQPRASREMALNRAIAVAEQILASLVR
PFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASA
LERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVL
EELGLVVDVGDWVITEACRQLRTWHQAKVRVPKVSVNISARQFSDGQLGTRIANILRSTG
LPPACLELELTESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLK
IDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLF
GRPMPANRFEAQFSNDALFMLD
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaacgccacttcgcccctgtccaatcgtgcacccgctgtcgtgcccggctcgccc
ctgcgcgggacattgaagggcgcgctggccacgctggtgctgctattgctcggcttgctg
ttctggcaactgctcgaccaactgcgcgaaacccaacagcaacagcgccaatacaccatc
gattacaccgccgatctcgccgcgcaggtcagcctgaacatggccctgaacgcgcaaatc
gccctcaacctgctaccgatcgtcgaacaaccgcaaacggccgacgagcagcaggccctg
gttcgcaaactccagcaatcgctccccgaactgcgcagcctggcactgctgagcccttcc
ggccgggtgctcagtgacagtgatgccaacagccacgacgccgactacctgggcgaactg
gttcgacgcagccgggcccaggcgcactatttcagcaatgccgaagacggctccgtggtg
catctattgctgcaccaggccagcggtagcggccgtggctattgggccctgcgcctgact
ccgaactttttcgccaccctgaccaagcaggccgatgtggggctgcgcccgctgtggctg
gtggaaaaccgtctcaaccagcaaatcatcagccgcgacgagagcctgccctcgatcagc
cccgcccatctatcgccggatgacctggaaaacaccgtactgaccgtccccctgagcagc
agcgactggcaactgcgggggttgttcgaccgtcgccaggtgatcgagcaactgctgccg
gccttcatcggcaaatgcctgctgggcttggcattttccttgttgcccgtgatcgcgctg
ttgaacatgcgtcggcgccagcggcagttgcacgaggggcggcgacgttaccaggatatt
ttcgaaggcaccggcgtggccctgtgcgtgcttgacctatcggggctcaaggcctttttc
gagcgggccggcctgcacactggcgatcaactgcgcacctggctgcaaaccactcaccaa
ctcgaacaattgcgccaggaagtccacgtcaccgaagtcaaccagatggcgttgaaactg
ctcaacgtcgactcctgcgatcaggcttggcagttgctggtcggcaagggggcgcaggac
aacaatcccgtcggctcgaagctgctcgaagcgctgctcgaccaacacaagcaactggaa
ctggagatcaagctccaggacgcccatggccgcgatcagcatctatggctggtgctgcgc
ctgccggaaaaacagcacgactgtaacgccgtcatcctgagcatcagcgacatcaccagc
cgcaagctgatcgaactctcgctgctcgaacgcgaagggttctggtccgacgtggtgcgt
accgtgccggaccatctctatgtgcaggacgtcatcagccagcggatgatcttcagcaac
catcacctgggccagaccctgggctacgaccgtaccgaactgcaccagatgggcgagtac
ttctgggaaatcctgctgcacagcgacgacgccgatcattaccacaacctgcgccaggaa
caacgacggggcggctatacgcagctgttgcaatgccaactgcgctttcgtcaccgcaat
ggcaagtggcgctgcttcgacatccgcgaacaggccctggcccgggatcggcataaccag
gtgacccggatcatcggcgtggccaaggacgtcaccgaacagatcgaggccagcgaatcc
cttcgcgacagcgagcaacgctaccggatgctcgccgaaagcatcagcgacgtgattttc
tccaccgacagcaagctttcgctcaactatgtcagcccgtcggtgcaagcggtgctgggc
tacaccgccgactggattttccagaacggctggcaatcgatcatcgccaatccgcaacaa
ctgaccggcatctacagcctgatggaccgcgtcagcaaagccctcgacaagcccggacaa
ctggccgagctgcgcaaccagatgcagacccaactgttcctgttcgactgcctgcgtgcc
gacgggcgcaagattcccatcgagctgcggctggtgctggtgtgggatgaacacggcgcg
ttcgaaggcgtgctgggtgtgggccgcgacatcagccagcaacgtcgcgccgaaaaagac
ctgcgcatggccgccacggtcttcgagcattcgacctcggcgatcctgatcaccgacccg
gccggctacattgtccaggccaacgaagcgttcagtcgcgtcagcggttatgccgtgtcg
caggtactggaccagttgcccaacatgctgaccgtggacgaccagcaggaggcgcacctg
cgctacgtgctcaagcagttgcaacagcacagcacctgggaaggcgaagtctggctcaag
cgccgcaatggcgaacactatccggcctgggtcggcatcaccgcggtgctggacgacgag
ggcgacctggccagctatgtgtgcttcttcagcgacatcagcgagcgcaaggccagtgag
cagcgcatccatcgcctggcctattacgacgccctgacccacctgcccaaccgcacgctg
ttccaggatcgcctgcacaccgcgctgcaatcggccgagcggcagaagacctgggtcgtg
ctgatgttcctcgacctcgaccgcttcaagccgatcaatgactccctcggccatgccgcc
ggcgaccggatgctcaaggaaatggccacgcgcctgctcggctgtgtcgctgatgacgac
accgtggcgcgcatgggcggcgacgaattcaccctgttgctgcaaccgcgcgccagccgt
gaaatggcactgaaccgggccatcgccgtggccgagcagatcctcgccagcctggtccgg
ccattcgtgctcgaaggtcgcgagttcttcgtcaccgccagtatcggtatcgccctgagc
ccccaggacggcaatgaactgagccagttgatgaagaacgccgacacggccatgtatcac
gccaaggagcgtggcaagaacaacttccagttctatcaggccgacatgaacgccagcgcc
ctggagcgtctggaactggaaagcgacctgcgccatgccttggagcagaacgagttcgtg
ctgtattaccaaccgcagttcagcggcgacggcaaacgcctgaccggcgccgaggccctg
ctgcgatggcgccatccgcgacgcgggttggtaccgccgggggacttcattccggtcctt
gaagaactcgggctggtggtggacgtcggcgactgggtcattaccgaagcctgccggcaa
ctcaggacctggcaccaggccaaggtccgggtgccgaaggtctcggtcaacatttccgcc
cggcagttctccgacggccagttgggcacacgcatcgccaacatcctgcgcagtaccggc
ctgccgccggcctgcctggagctggaactgacggaaagtatcctgatgcgcgaagtcagc
gaggcgatgcagattctcgccggattgaagaacctgggcctgagcattgccgtcgatgac
ttcggcaccggttattcatcgctcaattacctcaagcaattccccatcgacgtgctgaag
atcgaccgcaccttcgtcgacggcctgccgtccggcgagcaggatgcgcaaatcgcccgg
gcgatcatcgccatggctcacagcctcaacctggcggtgatcgctgaaggtgtcgaaacc
cacgagcagctggacttcctgcgcgaacacggctgcgacgaagtccagggttacctgttc
ggccggccgatgccggccaatcggttcgaagcgcagttcagcaatgatgcgttgttcatg
ctcgactga
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