KEGG   Pseudomonas thivervalensis: CE140_25145
Entry
CE140_25145       CDS       T11089                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
pthv  Pseudomonas thivervalensis
Pathway
pthv00740  Riboflavin metabolism
pthv01100  Metabolic pathways
pthv01110  Biosynthesis of secondary metabolites
pthv01240  Biosynthesis of cofactors
pthv02024  Quorum sensing
Module
pthv_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:pthv00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CE140_25145 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CE140_25145 (ribD)
Enzymes [BR:pthv01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CE140_25145 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CE140_25145 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Phage_Gp84
Other DBs
NCBI-ProteinID: AXA57503
UniProt: A0A176NM03
LinkDB
Position
complement(5662908..5664041)
AA seq 377 aa
MTASAQQAVLDAHYMARALELARRGHYTTHPNPRVGCVIVRDGQIVGEGWHIRAGEPHAE
VHALRAAGDNARGATAYVTLEPCSHHGRTPPCADALVNAGVARVVAAMQDPNPEVAGRGL
QRLAQAGIATESGVLEGEARTLNEGFLKRMEHGLPFVRVKLAMSLDGRTAMESGESQWIT
GPAARSAVQRLRAQASVVLTGADTVLADNARLTVRADELGLDAEQTALVMSRPPLRVLVD
GRLRVPLDAAFFKAGPALVATCMAVEEQYANGPECMIVAGDDGQVDLHRLLVELANRGVN
EVLVEAGPRLAGAFARQGLVDEFQIFIAGKFLGSSARPLLDWPLAQMKDAPQLKITEIRA
VGDDWRVIAVPVPPASV
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaccgcctcggcgcagcaggccgttctcgacgcgcactatatggctcgtgccctggag
ttggcgcggcgcggtcactacaccacccaccccaacccccgggtcggttgcgtgatcgtg
cgggacggacagattgtcggcgaaggctggcacatccgcgctggcgagcctcatgccgaa
gtccatgccctgcgtgccgccggcgacaacgcccggggcgccacggcttacgtgaccctc
gaaccgtgcagccaccacgggcgtacgccgccgtgtgccgatgcgctggtcaatgccggt
gtggcgcgggtggtggcagcgatgcaggaccccaacccggaagtcgccggacgcggcctg
caacgcctggcccaggccggcatcgccaccgaaagcggcgtgctggaaggcgaagcgcgc
acgctcaatgaaggtttcctcaaacgcatggagcacggcctgccgttcgtgcgggtcaag
ctcgccatgagcctcgatggccgtaccgccatggaaagcggcgaaagccaatggatcacc
ggccccgccgcacgctcggcggtgcaacgcctgcgcgcccaggccagcgtggtgctgacc
ggcgccgacacggtgctggcggacaacgcccggctgaccgtgcgcgccgatgagctgggg
ctcgatgccgagcagaccgcgttggtcatgagccgtccgccgctgcgggtgctggtggac
gggcgcctgcgggtgccgctggatgcggcgtttttcaaggccggtccggcgctggtcgct
acctgcatggcggtggaagaacaatacgccaacggtcccgaatgcatgatcgtggcgggc
gatgacggccaggtcgacctgcatcgcctgctggttgaactggcgaaccgtggcgtcaac
gaggtgctggtggaggccggtccgcgcctggcgggggctttcgcccggcagggactggtg
gacgaattccagatcttcatcgctggcaagttcctcggctcttcggcgcggccactgctg
gactggccgctggcgcagatgaaggacgccccacagctgaaaatcaccgaaatccgcgcc
gtgggcgatgactggcgagtcatcgccgttcccgttccaccggccagcgtataa

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