Pseudomonas thivervalensis: CE140_25980
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Entry
CE140_25980 CDS
T11089
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pthv Pseudomonas thivervalensis
Pathway
pthv03030
DNA replication
pthv03430
Mismatch repair
pthv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pthv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CE140_25980
03430 Mismatch repair
CE140_25980
03440 Homologous recombination
CE140_25980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pthv03032
]
CE140_25980
03400 DNA repair and recombination proteins [BR:
pthv03400
]
CE140_25980
Enzymes [BR:
pthv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CE140_25980
DNA replication proteins [BR:
pthv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CE140_25980
DNA repair and recombination proteins [BR:
pthv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CE140_25980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AXA57660
UniProt:
A0A2Z4ZZK6
LinkDB
All DBs
Position
5837347..5838054
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AA seq
235 aa
AA seq
DB search
MNLFSWLRPAQPTLPDALQQRLECLPVPSPLSEGNLREQRWVVLDLETTGLNLNKDQVLS
IGAVVIEDGAIDFSQQFERTLQCDQQKLGPSVLIHGLAPSTIAAGSDPAEALLAFMEFVG
DSPLLAFHAPFDSHMLGRALKDYLGYRLQHSFLDVADLAPMLCPQAPLRKAGLDEWIDWF
KLQVFDRHNASADALATAELALILFSRARQQQIHSPLELQQRLGQWKRRQQAPSL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctgttttcctggctgcgcccggcccagccgacgttgcccgacgcgctgcaacag
cgcctggaatgcctgccggtgccctcgccattgagtgaaggcaacctgcgggaacagcgc
tgggtcgtgctcgatctggaaaccaccgggttgaacctgaacaaggaccaggtgctgtcc
atcggcgcggtggtcattgaagacggcgccatcgacttcagccaacagttcgaacgcacc
ttgcagtgcgatcagcaaaagctcgggcccagcgtcttgatccatggcctggcgcccagc
accatcgccgccggcagcgacccggccgaggcgctgctggcgttcatggagttcgtcggc
gacagcccgctgctggcctttcacgcgccgttcgattcgcacatgctcgggcgcgccttg
aaagactacctgggctatcgcctgcagcattcgttcctcgacgtcgcggacctggccccg
atgctttgcccccaggcccctctgcgcaaggcgggcctggatgagtggatcgactggttc
aagctgcaagtcttcgaccgccacaatgccagcgccgacgccctggccacggctgaactg
gcgctgatcctgttcagccgcgcccgccagcaacagatccacagcccccttgagctgcaa
caacgcctgggccagtggaaacgacggcagcaggcgccttcgctttaa
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