Pseudomonas thivervalensis: CE140_25985
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Entry
CE140_25985 CDS
T11089
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pthv Pseudomonas thivervalensis
Pathway
pthv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pthv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CE140_25985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pthv03021
]
CE140_25985
Transcription machinery [BR:
pthv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CE140_25985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
Sigma70_ECF
HTH_17
HTH_24
Sigma70_r3
HTH_29
MerR
FaeA
Motif
Other DBs
NCBI-ProteinID:
AXA57661
UniProt:
A0A176NKY7
LinkDB
All DBs
Position
5838286..5838804
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AA seq
172 aa
AA seq
DB search
MSSVPSPHSDLVGALYRDHRAWLLAWLRRNVACAHRAEDLSQDTFVRLLGREELKAPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPEAEQPSVEEQQIILEDLKAIDRLLGKL
SSKARAAFLYNRLDGLGHAEIAERLGVSVPRVRQYLAQGIRQCYIALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcagtccccagtccccacagtgatttggttggtgcgttgtaccgtgaccatcgc
gcttggctattggcatggctgcgccgcaacgtggcgtgtgcgcaccgggccgaggacctg
agccaggacacttttgtgcgcttgctcggtcgcgaagagctgaaggcgccccgcgaaccc
cgggcgtttctggtggccatcgccaagggcctgttgttcgattatttccgtcgagcggca
ttggagcaggcctacctcaccgaactgatgctgattcccgaagccgagcagccctcggtg
gaagaacagcagatcatcctggaagacctcaaggccatcgatcgcctgctcggcaaactg
tcgagcaaggcccgcgcagccttcctctataaccgcctcgacggcctcggccatgcagaa
atcgccgagcgcctgggcgtttcggtgccgcgggtacggcaatacctggcccagggcatc
cgccagtgctacatcgccctgtatggagagccgacgtga
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