KEGG   Pseudomonas thivervalensis: CE140_25985
Entry
CE140_25985       CDS       T11089                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pthv  Pseudomonas thivervalensis
Pathway
pthv02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pthv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CE140_25985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pthv03021]
    CE140_25985
Transcription machinery [BR:pthv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CE140_25985
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Rv2175c_wHTH Sigma70_ECF HTH_17 HTH_24 Sigma70_r3 HTH_29 MerR FaeA
Other DBs
NCBI-ProteinID: AXA57661
UniProt: A0A176NKY7
LinkDB
Position
5838286..5838804
AA seq 172 aa
MSSVPSPHSDLVGALYRDHRAWLLAWLRRNVACAHRAEDLSQDTFVRLLGREELKAPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPEAEQPSVEEQQIILEDLKAIDRLLGKL
SSKARAAFLYNRLDGLGHAEIAERLGVSVPRVRQYLAQGIRQCYIALYGEPT
NT seq 519 nt   +upstreamnt  +downstreamnt
gtgtcgtcagtccccagtccccacagtgatttggttggtgcgttgtaccgtgaccatcgc
gcttggctattggcatggctgcgccgcaacgtggcgtgtgcgcaccgggccgaggacctg
agccaggacacttttgtgcgcttgctcggtcgcgaagagctgaaggcgccccgcgaaccc
cgggcgtttctggtggccatcgccaagggcctgttgttcgattatttccgtcgagcggca
ttggagcaggcctacctcaccgaactgatgctgattcccgaagccgagcagccctcggtg
gaagaacagcagatcatcctggaagacctcaaggccatcgatcgcctgctcggcaaactg
tcgagcaaggcccgcgcagccttcctctataaccgcctcgacggcctcggccatgcagaa
atcgccgagcgcctgggcgtttcggtgccgcgggtacggcaatacctggcccagggcatc
cgccagtgctacatcgccctgtatggagagccgacgtga

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