Pseudomonas thivervalensis: CE140_26135
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Entry
CE140_26135 CDS
T11089
Name
(GenBank) choline dehydrogenase
KO
K03333
cholesterol oxidase [EC:
1.1.3.6
]
Organism
pthv Pseudomonas thivervalensis
Pathway
pthv00984
Steroid degradation
pthv01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pthv00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
CE140_26135
Enzymes [BR:
pthv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.6 cholesterol oxidase
CE140_26135
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
Pyr_redox_2
Abhydrolase_6
Abhydrolase_1
FAD_binding_2
FAD_oxidored
NAD_binding_8
FAD_binding_3
Pyr_redox
Thi4
HI0933_like
GIDA
Fer4_2
Fer4_9
Fer4_6
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AXA57691
UniProt:
A0A2Z4ZK20
LinkDB
All DBs
Position
complement(5871559..5875011)
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AA seq
1150 aa
AA seq
DB search
MTRISTPISDIQEHYDVVVIGSGYGGGIAASRLSRAGRKVCLLERGREIQPGEYPNTLLA
ATEELQVHDPDGHIGSRTGLFDLHVNAQQNVVVGCGLGGTSLINANVALEPEPGVFEDPR
WPQAVRDHQDTLLKDGYARAREMLKPNPYPASAPNLPKLDAHKKSADYLKQGAHFYKPPI
NVTFDKLPNNLNHVGVEQLPCNGCGDCVSGCNNKAKNTTLMNYLPDAWNHGTEIFCQAEV
RHLERDGDGWIVHFQYLDSGRELFSAPTLFVRADIVVVSAGTLGSTEIMLRSRDKGLSMS
NQLGEHMSGNGDILGFGHNCDQVINGIGFGAHSAKELEPVGPCITSIIDMRTEGDWRSRM
VIEEGSIPGALGRAMVPSMAAFAEMIGVPTDTGFGASLRYKGREAESFLRGPYYGALHNM
QTYLIMSHDNAKGRMLLDNKDQLRIDWPGVGEQENVTLGNERLHQSTKALGGIWVENPIW
TKLLKHSIVSVHPLGGCVMGEDATQGVVNHKGQVFSGASGTDVYPGLYVTDGAVIPTSLA
VNPLLTISAVSERNMGLLAADRGWIIDYTLPSAPRKAVAAPTLGVQFTETMKGYFSTAFT
QAQGTDLSLYEAAAKRGKADNSPIEFTLTITAADLNRLIKEPEHAATLVGTLDAPLLSPQ
PLVASNGVFNLFEQYQEQVGVRHMNYDMKLTAEDGSDYYFSAFKTVPEDNGVLNIWHDTS
TLYVTLYRGPDKTGEVLGCGVMHILPADFAKQMTTMKVLNARNERERVEALARFGKFFAG
ILWESYGGVFAGDVYFNPDAPPRLKRPLDAPAPVVHFFQTEDNVELRLTRYQAGTKGPVM
LVHGLGVGSNIFSTDTIHTNLLEYLCKHEYDVWLLDLRVSILLPASKNEWNGDQVAQYDF
KAAIEQIQQATLARDVQCVVHCYGATTFFMSMLAGLQGVRSVVCSQIAADTVVATATGLK
AGLHLPGMLDAIGIKSLTAYADTKESWFNKLYDKALNGYARIEAQGYCTNPVCHRITFMY
ASLYRHDTLNETLHDNLHELFGESNIQTFEHLALIVRKGHLVDFKGNDVYMPHFDRLKLP
ICFISGADNQCYLPQSTLKTYERLCEMHGPQLFSRHEVPGYGHIDCMFGKDAVMDVYPII
LEHLEKTAQG
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgacacggatctcaacccccatcagtgatatccaggagcactacgacgtcgtcgtcatc
ggttccggttacggcggcggcattgctgcctcgcgcctgtcccgggccgggcgcaaggtg
tgcctgctggagcgtggccgggaaatccagccgggcgaataccccaacaccctgctcgcg
gccaccgaggaactgcaggttcatgaccccgacgggcacatcggctcgcgcaccggcctg
ttcgacctgcacgtcaacgcccagcagaatgtggtggtcggttgtggcctgggcggcacg
tcgctgatcaatgccaacgttgcgctggagccggagcctggcgtgttcgaggacccgcgt
tggcctcaggcggtacgggaccaccaggacacgttgctcaaggacggctacgcccgggcc
cgggagatgctcaagcccaatccctacccggcgtcggcaccgaacctgcccaagctcgac
gcccataagaaatcagccgattacctcaagcaaggcgcgcatttctacaagccgcccatc
aacgtgaccttcgacaagttgcccaacaacctcaaccacgtcggcgtcgaacagttgccc
tgcaatggctgtggcgattgcgtctcgggctgtaacaacaaggccaagaacaccacgctg
atgaactacctgccggacgcctggaaccacggcacggaaattttctgccaggccgaggta
cggcacctggaacgagacggcgacggctggatcgtgcacttccaatacctggacagcggt
cgcgaactgttctcggcgcctacgttgttcgtgcgggccgatatcgtcgtggtctccgcc
ggcaccctgggctccaccgaaatcatgctgcgctcgcgggacaagggcttgtccatgtcc
aaccagttgggcgagcacatgagcggcaacggcgacatcctcggcttcggccacaactgc
gaccaggtcatcaacggcatcggcttcggcgcccattcggccaaggagctggagccggtg
gggccgtgcatcacctcgatcatcgacatgcgcaccgaaggcgactggcgcagccgcatg
gtcatcgaggaaggttcgattcccggtgccctcggccgggccatggtgccgagcatggcg
gcgttcgccgaaatgatcggcgtgcccaccgacaccggtttcggtgccagcctcaggtac
aagggccgggaggccgagagcttcctgcgcgggccgtattacggcgcgctgcacaacatg
cagacttacctgatcatgagccatgacaacgccaagggccgcatgctgctcgacaacaag
gaccagttgcgcatcgactggcccggcgtcggcgaacaggagaacgtcaccctcggcaac
gagcgcctgcaccagagcaccaaggccctgggcgggatctgggtcgagaacccgatctgg
accaagctgctcaagcacagcatcgtctcggtccatcccctgggcggttgcgtgatgggc
gaggacgcgacgcaaggcgtggtcaaccacaagggccaggtgttcagtggcgccagcggt
accgatgtctacccgggcctgtacgtgaccgacggcgcggtgatccccacgtcgctggcg
gtcaatccgttgctgacgatctcggcggtgagcgagcgcaatatggggctgctggcagcc
gaccggggctggatcatcgactacacactgccttcggccccgcgcaaagccgtggcggcg
ccgaccctcggcgtgcagttcaccgaaaccatgaagggctacttctccactgccttcacc
caagcccagggcaccgacctcagtctgtatgaagcggcggccaagcgcggcaaggccgac
aactcacccatcgaattcaccctgaccatcaccgcggccgacctcaaccgcctgatcaag
gaaccggaacacgccgcaaccctggtgggcaccctcgatgcaccgctgctctcgccgcaa
ccactggtcgccagcaatggggtgttcaacctgttcgagcagtaccaggagcaggtcggc
gtgcggcacatgaactacgacatgaagctgaccgccgaagatggcagcgactattacttc
agcgctttcaagaccgtgcccgaggacaacggcgtgctgaacatctggcatgacaccagc
acgctctatgtgacgctctatcgcgggccggacaagaccggcgaagtgctcggctgcggg
gtgatgcacatcctgccagccgacttcgccaagcagatgaccaccatgaaagtgctcaac
gcccgcaacgagcgtgagcgcgtcgaggccctggcgcggtttggcaagttcttcgccgga
atcctgtgggagagctacggcggtgtcttcgccggcgatgtctacttcaacccggacgcg
ccgcctcggttgaaacggccgctggatgcgccggcgccggtggtgcatttcttccagacc
gaagacaacgtcgagctgcgcctgacccgttaccaggccggtaccaaaggcccggtgatg
ttggtccatggcctgggcgtgggctcgaatatcttctccaccgacaccattcacaccaac
ctgctggaatacctgtgcaagcacgagtacgacgtctggctgttggatctgcgggtgagc
atcctgctgccggccagcaagaacgaatggaacggcgaccaggtggcccagtacgacttc
aaggcggccatcgagcagatccagcaggcgaccctggcccgtgacgtgcaatgcgtggtg
cattgctacggcgcgacgacgttcttcatgtcgatgctggcggggctgcaaggggtgcgc
tcggtggtctgctcgcagatcgccgccgacacggtggtcgccaccgccaccgggctgaag
gccggtctgcatttgccggggatgctcgatgccatcggcatcaagtcccttacggcctac
gccgataccaaggaaagctggttcaacaaactctacgacaaggccctcaacggctatgcc
cggatcgaggcccagggctattgcaccaacccggtctgccatcgcattacgttcatgtat
gcatcgttgtaccgccacgacaccctcaacgaaaccctgcacgacaacctgcatgagttg
ttcggcgagtcgaacatccagaccttcgagcacttggcgctgatcgtgcgcaaggggcac
ctggtggacttcaagggcaacgacgtctacatgccgcatttcgaccggttgaagttgccg
atctgcttcatcagcggcgccgacaaccagtgctacctgccgcaaagcaccctcaagacc
tacgagcgactgtgcgagatgcacggcccgcagttgttcagccgccatgaagtgccgggg
tacggtcacatcgactgcatgttcggcaaggatgcggtgatggatgtgtatccgatcatt
cttgagcacctggagaagaccgcgcagggctag
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