Pseudomonas thivervalensis: CE140_27935
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Entry
CE140_27935 CDS
T11089
Name
(GenBank) type IV secretion protein Rhs
Organism
pthv Pseudomonas thivervalensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RES
PAAR_motif
RHS
Motif
Other DBs
NCBI-ProteinID:
AXA58029
UniProt:
A0A2Z4ZJ34
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All DBs
Position
6250678..6255129
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AA seq
1483 aa
AA seq
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MSDALWAARLGDALNHTSMMADILGGVLEVAANIAITAVATAAVVAATGITVATGGLGCF
LLGAVVGAVVGLAMSKTGADKGLSDICEGIGNALFPPTVQANILTGSTNTLTNNIPAARA
AGAIQSHVAPAGTELEAPEPEAEPSYLDMAENFFSQMWRPTVATPAPGAVPKPLDMIVCM
KHPPMPPQFLAEGSDKVTINGQPAVRSGDRSTCDATVVSAGLISPDVTIGGGSVVVREIR
SGKTPGVGLAVTALLMLKGGKGKFLSNLPCMLVGGAASMAVSSAMGAAANAAMGSSNPVH
AATGAKVLGDIEEMDFVLPGILPIDWQRFYNSRDERHDGLFGAGWSVPYEVRIEILPHPE
GGETLVYTDEQGRRIDMGSIPLGGAVFSAGEGLSVRRHANGELLIESADGLYRLFEPTPA
RASRLRLNQLGDRNDNRIYLDYDDSGRLAQLRDTFDLTRIALAYDERWPQRVSRIERLYA
DQRREVLMHYGYDDQGTLAQVRQSNGQVKRRYAYDAGRRMVEHQLPTGLRCFYEWALVED
LEWRVVRHWTDAGDTYTFDYDLVAGTTRITDGLNRISTRRWDARYQITEATDALGRTWTF
QWNDESQLLGATDPNGGQHQFSYDEAGNLCETRDPLGRSESTLWLEHWALPLAETDAAGN
TWQYRYDSRGNRIRETDPLGHVTRYRHDAHGQVVEVIDATGKRKTLRWTPLGQLSEHTDC
SGYTTRLSYCERGLLLSSTDALGERTLFSYDDQGRLLGKQLPDGRTEHYQRDASGQLIGY
SDPAGHTTHFQHTPSGQLQVRTDAHGRRVELSYDNYGRLLALTNENGERYRFAWDAADRL
TAQHSLDGSLKRYAYDPLDNVTRVEALAVPGSTDLALAPQAPIIHELQRDAVGRLVAKVT
EDGRTEYRYDALDQVNAITFTGQGGETQTVAFAYDPLGQLTTEQGWAGCLEHRYDELGNL
TQTLLPDGRWLNRLHYGSGHLHQINLDGQVISDFERDRLHREVLRTQGRLSTRSEYDRSG
RLRARQRRQQDQSTLLPPAAQSLFGYDASDQLVERFDSQPNAAHRQLLHYDATGRILASQ
DNLQGQREGFAYDPAANLLDELSAGAGRVAHNRLLTYQDKRYRYDGFGRMVEKRSARRGV
QRFRYDAEQRLAEVHNDNGSVVKMTYDPLGRRIEKAEYDRHGTLLGRTRFTWDALQLLQE
HRDSQTSLYLYVDDSHEPLARVDGLGEQQKIRYYHNDFNGQPEQLSEADGHTLWRARHQL
WGSTAEELREPYYIEEQNLRFQGQYLDRETGLHYNTLRFYDPDIGRFTTPDPIGLAGGLN
LYQYAPNPVSWVDPSGLMKCSTPPKGRKVNRTVYRFEEPGRISTTWTAHKWNVASRHRYT
APGLGGVYGANSRKTAMGEVNHWGVDLSTRVLVSKKVQLNNVLDLTRADVRKQLGVSLKS
ITGDKYTQTHQIGAWAKANGYDGILAPSARNPTGSNLISFAGF
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcactctgggccgcccgactgggcgacgcactgaaccacacctcgatgatg
gccgatatcctcggcggcgtcctggaagtggccgcgaacattgcgatcaccgccgtggcg
acggctgccgtggtggccgcgacaggcatcaccgttgccacgggcgggttgggttgtttc
ctgctcggtgccgtggtgggcgccgtcgtcggccttgccatgagcaagaccggggccgac
aagggcttgagcgatatctgcgagggcatcggcaacgcccttttcccgcccacggtgcag
gccaacatcctcaccggctccaccaacaccctgaccaacaacatccctgccgcccgcgcc
gctggggcgattcaatcccatgtcgccccggccggcaccgagcttgaggcacccgagcca
gaagccgaacccagttacctggacatggccgagaacttcttctcgcagatgtggcgcccc
accgtcgccacgcccgcgcccggtgccgtgcccaagccgctggacatgatcgtgtgcatg
aagcatccgccgatgccaccgcagttcctggccgaaggctcggacaaggtcaccatcaac
ggccagcccgccgtgcgcagcggtgaccgcagcacctgcgatgcgacggtggtgtcggcc
gggttgatttcccctgacgtgaccattggcggcggttcggtggtggtgcgcgagatccgc
agcggcaagaccccaggcgtgggcttggccgtcaccgccttgctgatgctcaagggcggc
aaaggcaaattcctcagtaacctgccgtgcatgctggtgggcggcgcggcatcgatggcc
gtcagcagcgcgatgggcgccgcggccaatgccgccatgggctcgtcgaacccggtgcat
gccgccaccggggccaaggtcctgggcgatatcgaggagatggacttcgtcctgcccggc
atcctgccgattgactggcagcgcttctataacagccgcgacgaacgccatgacgggctg
ttcggggccggttggagcgtgccctatgaggtgcgcatcgaaatcctgcctcaccccgag
ggcggcgaaacgctggtctacaccgatgaacagggccggcgcatcgacatgggctcgatt
cccctgggcggcgccgtgttcagtgccggcgaaggcctcagtgtgcggcgccatgccaac
ggcgaactgctgatcgagagcgccgacggcttgtaccggctgttcgaacccacgcccgcc
cgtgcatcgcggctgcgcctgaaccaattgggtgatcgcaacgacaatcgcatctacctg
gactacgacgacagcggacgcctggcgcaactgcgcgacaccttcgacctgacccgcatc
gcgctggcgtatgacgagcgctggccgcaacgggtcagccggatcgagcgcctctatgcc
gatcaacgccgcgaagtgctgatgcactacggctacgacgaccagggcaccctggcgcag
gtccgccagtccaacggccaggtgaaacgtcgttatgcctacgatgccgggcggcgaatg
gtggaacaccaactgcccaccgggcttcgctgtttctatgaatgggcgttggtggaagac
ctggaatggcgggtcgttcgtcactggaccgatgccggcgacacctacaccttcgactac
gacctggtggccggcaccacgcgcatcaccgacggtttgaatcgcatcagcacccgacgc
tgggatgcccgctaccagatcaccgaagccaccgacgccctgggccgcacctggaccttc
cagtggaacgacgaaagccagctactgggggcaaccgaccccaacggcgggcagcatcag
ttcagctatgacgaagccggcaacctctgcgaaacccgcgacccgctggggcgcagcgaa
tcgacactgtggctcgagcactgggccctgcccctggctgaaaccgatgccgcgggcaac
acctggcagtaccgctacgactcacgaggcaatcgcattcgcgaaaccgacccgctgggt
cacgtcacccgctaccgccacgacgcccacggccaagttgtggaagtcattgacgccacc
ggcaaacgcaagacattgcgctggacgcccctgggtcaactcagcgaacacaccgactgc
tccggttacaccacacgcttgagctactgcgagcgcgggctgttgctcagcagcaccgat
gcgctgggggagcggacgctgttcagctacgacgatcaaggccggttgcttggcaagcaa
ctgccggacgggcgcaccgagcactaccagcgcgatgccagcggacagttgatcggctat
agcgaccccgccgggcacacgacgcatttccagcacaccccaagcggtcaactgcaggtg
cgcaccgacgcccatggccgccgggtagaactgagctacgacaactatgggcgcctattg
gcgctgaccaacgaaaatggcgagcgctaccgatttgcctgggacgccgccgaccgcttg
accgcccagcacagcctggacggcagcctcaagcgctacgcctacgacccgctggacaac
gtcacccgcgtagaggcccttgcggtgcccggcagcactgaccttgcgctcgcaccccaa
gcgccgatcattcatgagctgcaacgcgatgcagtgggacggttggtggcaaaagtcacc
gaagacgggcgtaccgagtaccgctatgacgcgctcgaccaagtcaacgccatcaccttc
accggccagggcggcgaaacgcaaaccgtggcgttcgcttacgaccccttggggcaactg
actaccgagcagggttgggccgggtgcctcgagcatcgctacgacgaactgggcaacctg
acccagacgctgctgcccgatggccgttggctgaaccgcctgcactacggcagcggccat
ctgcaccagatcaacctcgatggccaagtcatcagcgatttcgaacgcgaccgtctgcac
cgcgaagtgctgcgtacccaagggcgcctgagcacccgcagcgaatacgaccgcagcggc
cggctgcgtgcccgccagcgtcggcagcaagaccaatccaccttgctaccccccgcggcg
caatcgctgtttggctatgacgccagcgaccagttggtggaacgcttcgacagccagccc
aatgccgcccatcgccaactgctgcactacgacgccaccggccgcatcctcgccagccag
gacaacctccagggccagcgtgaaggctttgcctatgaccccgccgccaatctgctcgac
gagctctcggccggcgccgggcgggtcgcgcacaaccgcctgctgacctaccaggacaag
cgctaccgctacgacgggtttggccgcatggtggaaaagcgcagtgcccggcgtggcgtc
caacgttttcgctacgacgccgaacaacgcctggcggaggttcacaacgataatggttcg
gtcgtaaaaatgacctacgacccgctgggtcgacgcatcgagaaagccgaatacgaccgc
cacggcaccttgctcggtcgcacccgtttcacctgggatgcgctgcaactgttgcaggaa
caccgcgacagccagaccagcctctacctctacgtcgacgacagccacgaaccgctggcg
cgcgtcgacggcctgggcgagcagcagaagatccgttattaccacaacgacttcaatggc
cagcccgagcagctctcggaagccgacggccacaccctctggcgcgcccgtcaccagctg
tggggcagcacggccgaagagttgcgcgaaccctattacatcgaagagcagaacctgcgt
ttccagggccaatacctggaccgcgaaaccgggctgcactacaacaccctgcgcttctac
gacccggacatcggccgcttcaccacaccggaccccatcggcctggcgggtgggctgaat
ctctaccagtacgcgccaaacccggtcagttgggtcgacccgtcagggctgatgaaatgc
tcgacgccgcccaaaggtcgcaaggtcaaccggacggtctatcgctttgaagagccagga
cggatcagcaccacgtggaccgcgcacaagtggaacgtggcctcccggcaccgctacacc
gccccggggctgggcggtgtctatggcgccaactcacgcaagaccgccatgggcgaagtc
aatcactggggggtggacctctccacacgggtgctggtgagcaagaaagtgcagctcaac
aacgtcctggacttgacccgggccgatgtgcgcaagcaactgggggtttccctcaagagc
atcaccggcgacaaatacacccagacccatcaaatcggcgcctgggccaaggctaatggc
tatgatgggatcctggcgccgtcggcgcgaaacccgaccggcagcaacttgatttccttt
gcaggtttttga
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