Phaeodactylum tricornutum: PHATRDRAFT_11009
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Entry
PHATRDRAFT_11009 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pti03021
]
PHATRDRAFT_11009
Transcription machinery [BR:
pti03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
PHATRDRAFT_11009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
7197628
NCBI-ProteinID:
XP_002178359
JGI:
11009
UniProt:
B7FUQ3
LinkDB
All DBs
Position
4:<1082486..>1084393
Genome browser
AA seq
535 aa
AA seq
DB search
LRQYQLEGIAWLRFLHTLRLNGALCDSMGLGKTLQALICVAISHDVVHHAAPDSKPVSIV
VCPSTLVRHWIAEINRFFKSDDPVFFPLELSGSSTSRRAVWEKGLVFCNIIVTSYSVLRS
DIRMLASQSYHYCVLDEGHLLKNPKTETAKASRQLRSKHRLLLSGTPVQNHVHELWAVFD
FLMPNFLGSSVFFSEKYARTISKGQAPGASVREISEGIEKLKTLHQQVLPFILRREKQQV
LRELPSKLVTQIEVPMSDLQRRLYTDFCSFADVQQSLRALDRAAKDDLGDRCLEQAGRSS
LQALLFLRLLSTHPWLVRSAIPVASEISDNDWLRFDTSGKIRALADLLRELSIFTDDLSA
ADNDSSLLYCEDDHTKCLIFAQFIQSLDVVEKLLFKPHIPSLKYLRLDGRVPARRRYAIA
EEFNRNDEIKVLLLTTRVGGLGLNLTGADTVIFLEHDFNPFADLQAMDRVHRIGQKKAVC
VYRLVLVDSIDQRIMKLQEKKLAMSEAIVNADNSTMFSMGTDRLLDIFTMRSDQE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ctccggcagtatcaactggagggaatcgcttggttacgttttctacatacactcagactg
aacggcgctctgtgcgattctatgggacttgggaaaacactacaggctttgatttgcgtt
gccatttctcacgacgtagtccaccatgccgcaccagatagcaaaccagtctccatcgtt
gtctgtccttctactctggttcgacactggatcgctgaaatcaacagatttttcaaaagc
gacgatccggttttctttcctctcgagctttctggtagtagcacgagtcgtcgagcagta
tgggaaaagggcttagtattttgcaacataattgttacaagctattctgttctacggagc
gatatacgaatgcttgcatcgcaaagctatcactattgtgtgctcgatgagggccacctc
ctcaaaaatccaaagacagagacggcgaaggcgtctcgtcagctgcggtcgaagcaccgt
ctccttttgtcaggaacgccggtgcagaatcatgttcatgaactgtgggctgtatttgac
ttcttaatgccaaattttttgggatcctcggtatttttctcagaaaagtatgccagaact
atatcgaaaggacaagctcctggcgcatctgtgagagagatcagcgaaggaatagaaaag
ttgaagacgttacatcagcaagtactaccgttcatactccggagagagaaacaacaagtt
cttagagaattaccatcaaaattagtcactcagattgaagttcccatgagtgatctgcag
cgaaggctctacactgatttctgctcgtttgcagatgtccaacagtcactccgggctcta
gatcgcgctgcgaaggacgatctcggcgatagatgcctggagcaggcagggcgtagctcg
ctacaggcccttttgtttttaagacttctctcaactcacccatggcttgtcagatccgcc
ataccagtcgcctcggaaatcagcgacaacgattggcttcgttttgatacctccggtaaa
atcagagcgttggctgacttactccgagagcttagtattttcaccgacgacttaagcgct
gccgataacgattcgtcacttttgtactgcgaggacgaccatacaaagtgcttgatcttc
gctcagttcattcaaagtcttgatgttgtggaaaagcttttattcaagcctcacatacca
tcgctgaaatatcttcgattggatggaagagttcctgccagaagacgctatgccattgcc
gaagagttcaaccgtaacgatgagatcaaggttttgctgctaacaacaagggtcggtggt
cttggactaaacttaacaggagcggacactgtaatttttctcgaacatgactttaatcct
tttgctgatcttcaagcaatggaccgggtccacagaattggccaaaagaaggctgtatgc
gtttaccggttagttctggtcgactcaattgaccagagaattatgaagttacaagaaaag
aagttggctatgagcgaggcgatagtgaacgccgacaattctactatgttcagcatgggg
actgatcgattgcttgacattttcacgatgagaagcgaccaagag
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