Phaeodactylum tricornutum: PHATRDRAFT_11441 Help Entry PHATRDRAFT_11441  CDS       T01075                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism pti  Phaeodactylum tricornutum Pathway pti03020   RNA polymerase pti03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pti00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PHATRDRAFT_11441   09124 Replication and repair    03420 Nucleotide excision repair     PHATRDRAFT_11441  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pti03021]     PHATRDRAFT_11441    03400 DNA repair and recombination proteins [BR:pti03400]     PHATRDRAFT_11441 Enzymes [BR:pti01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PHATRDRAFT_11441 Transcription machinery [BR:pti03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      PHATRDRAFT_11441 DNA repair and recombination proteins [BR:pti03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       PHATRDRAFT_11441 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 DUF3013 DUF7016 Motif Other DBs NCBI-GeneID:  7199864 NCBI-ProteinID:  XP_002178926 JGI:  11441 UniProt:  B7FVG3 LinkDB All DBs Position 5:complement(83638..87443) Genome browser AA seq 1212 aa AA seqDB search MAYNDGGEALPEEEGDEVMDIDEIPVTQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTM QELVDDSGDIRVSPEIQHMVGYDDEAYDREQEKETKFVFEIHFGQVYLSKPTTVEKDGTI TNMFPHEARLRNMTYSAPLYVDVDLNQYQVGREVNVNDPSEDLGEPVATEHAKKEFLGYV PIMLRSLFCVLSDKDDADLSDLGECVYDQGGYFVINGSEKVIIAQERLSNNHVYAFKKKQ PSKFSWVIETRSQVENSTRPVSTLYIQMYHKGGRGAIEGNQIRSTLPYIRTDIPVVIIFR ALGYVADRDIIEHVVYDLTDGEMMDLFRPSLEEAFVIQRQDVALDFIGRRGSARDVTKED RMRYAQAILQKEVLPHVGTEEHCETKKGFFIGYAVHKLLMCRLGRAEEDDRDHFGKKRLD LAGPLLGGLFRVLFRKLTKDVRKHLQRCLDEGKHFNIGAAIKSNHITDGLKYSLATGNWG DKGMATKAGVSQVLNRLTYASSLSHLRRCNTPLARTGKQAKPRQLHNTHWGMVCPAETPE GQAVGLVKNLALMAYITTGTAQVPVLEFLEEFSTENLTDILPSVIAEPNTCKIFVNGNWV GIHRDPKALEETFRSLRRMVDIDAEVSIVRDIADKEVRIYTDAGRICRPLFVVQEQKLAI KKHHIMQLQGMDPNEKKLTWTDLLMEGLVEYIDTEEEETTMVAMEPNDLDSDDSYSSTYT HCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNYQVRMDTMAHVLHYP QKPLCTTRAMEFLHFRELPSGVNCIVGILVYTGYNQEDSLILNQSAIDRGLFRSSYYRCY IDQEKASTVGTIGSLTSELFEKPSMDSTRGMKHGEYGKLDDDGLVAPGTRVSGDDVLIGK TAPIDATAGMPSRYSKRDCSTSMKANEHGIVDNVLISTTKEGYRFTKVRIRNVRTPQIGD KFASRHGQKGTIGMTYRQEDMPFTVEGIVPDIIVNPHAIPSRMTIAQLIECLLGKVVVFQ GCEGDATPFTDVTVEDISTRLHAMGYQRHGNEALYQGHTGRPLNARVFIGPTFYQRLKHL VDDKVHSRARGPVAMLTRQPLEGRSRDGGLRMGEMERDCLITHGCANFMRDRFFVNSDQY RIHICERCGLTAQANLKKMTYECRSPMCVGRPTQICQVEIPYAAKLLLQELNSMCIQTRI YTKNVTTRDNSY NT seq 3639 nt NT seq  +upstreamnt  +downstreamnt atggcgtacaacgacggaggcgaagccttaccggaagaggaaggagatgaagttatggac attgacgaaattcccgtcacgcaagaagacgcctgggcagtgattagtgcctactttgaa gaaaaaggcttagtccgccagcaactcgattcttttgacgagttcatccaaaataccatg caggaactcgtggacgattccggagatattcgcgtctcgccggaaattcagcacatggtg ggctacgacgacgaagcctacgacagagaacaggaaaaggaaacaaagtttgtctttgag attcactttggccaagtttacctttccaaacccaccacggtcgagaaggacggaaccatc accaacatgttcccacacgaagcccgactccgaaatatgacctattccgcaccgctttac gttgatgtggacttgaatcagtatcaagtgggacgagaggtcaatgttaacgacccctcg gaggatttgggagaacctgtcgccaccgaacacgccaagaaggaatttctcggttacgtg cctatcatgttgcgttccctcttttgtgtactttcggacaaggacgacgccgatttgagt gacctgggggagtgtgtttacgatcagggtggttatttcgtcattaatggatcggaaaaa gtcattattgcgcaagagcgattgtccaacaatcacgtttacgcctttaaaaagaagcag cccagtaagttttcctgggtcattgaaacccgcagtcaagtggaaaactccactcggcct gtgtcaaccctctacatccaaatgtaccacaaaggtgggcgcggggccattgaaggcaat cagattcgttccacgttgccctacattcgcaccgatatccccgtcgttatcatatttcga gcactgggatacgtagcggaccgggacattatcgagcacgtcgtgtacgatctgacggat ggggaaatgatggacttgttccgaccttcgcttgaagaggctttcgtcattcagcgacag gatgtggcgttggattttatcggtcggcgtggatcggcacgggacgtgaccaaggaagac cggatgcggtacgcacaagccattctacaaaaggaagttttgccgcacgtcggaacagaa gagcactgcgaaaccaaaaaaggtttctttatcggttacgccgtacacaagttactcatg tgtcgcttgggacgggccgaagaagacgaccgtgatcactttggtaaaaagcgcttggat ttggccggacccttgttgggcgggctatttcgcgtcttgttccggaaactgactaaggat gtgcgcaaacatttacaacgatgcttggatgaaggcaaacacttcaatattggagccgct atcaagagcaaccatatcaccgacggactcaaatactcgttagcaacgggaaactggggt gacaagggaatggctaccaaagcgggtgtctcacaagtgttgaatcgtctgacctacgct tcgtcgctctcccacctccgtcgatgtaacacgcccctggcccgcaccggaaaacaggcc aagccgcgtcagttgcataatacgcactggggtatggtatgcccagccgagactcccgaa gggcaagccgttggtctcgtcaagaatctggccctcatggcgtacattacgaccggtacc gcacaagttcccgtcttggagttcctggaagagtttagcaccgaaaacttgacggacatt ttgccctcggtaattgccgaaccgaatacttgcaaaatttttgttaacggaaattgggta ggtattcatcgtgatccgaaagcactcgaagagacattccgatcattgcgtcgaatggtg gacattgatgccgaggtttcgattgttcgagacattgccgataaagaagttcgcatttac acagatgccggacgcatctgccgcccattgtttgtcgttcaggaacaaaaactggcaatc aagaagcaccacatcatgcagttacagggcatggatccgaatgaaaagaagttgacctgg acggatcttctcatggagggtttggtcgaatatattgatacagaagaggaggagaccacc atggttgccatggaaccgaacgatttggattccgacgattcgtattcctcaacgtataca cactgcgagattcacccgtctatgattcttggtgtatgtgcctcgatcatcccctttcct gatcacaaccaatctcctcgtaacacttatcagagtgccatgggaaagcaagctatgggt atttatgcgtcaaactaccaagtacgcatggacacgatggcgcacgtattgcattacccg cagaaaccattatgtactacacgagcgatggagtttttacatttccgagaactcccaagc ggtgtaaattgcattgtcggcattctcgtttatactgggtacaatcaggaagattccttg attttgaatcagtcagcgattgaccgtgggctcttccggtcctcctattatcgctgttac attgaccaggagaaagccagcactgtcggcacgattggatccttgacgtcggaactgttc gaaaaacctagtatggacagtacgcgcggaatgaaacacggggagtacggaaaactcgac gatgatggtctggtagctcccggtactcgcgtgtcgggagacgatgttttgattggcaag acggcaccaattgacgctacggccggtatgccttcacgttactccaaacgcgattgcagc acgtccatgaaggccaacgagcatggcattgttgacaacgtgctgatcagtacgacaaaa gaaggatatcggtttacgaaggttcgcattcggaacgtccggacgccgcagattggtgac aagtttgcctcacgtcacggacaaaagggaacgatcggaatgacttaccgtcaagaagac atgcctttcaccgtagagggcatcgtgccggacattattgtgaatccccacgctattcct tctcgaatgactatcgcacagttaattgagtgtcttttaggaaaggttgttgtctttcag ggatgcgaaggagatgctactccttttacggacgtgaccgtcgaagatatcagtacccgc ttacacgccatgggataccaaagacacggaaacgaagctttatatcagggacatacagga cgcccattgaatgctcgtgtttttatcggtccaaccttttaccagcgtttgaagcatttg gtcgacgataaggtccactctcgtgctcgcggtccggttgccatgcttacgcggcaaccg ttggaaggtcgatctcgggatggtggtttgcgcatgggagagatggaacgcgattgcctg attacgcatggctgtgccaactttatgcgcgatcgcttctttgtcaattcggaccagtac cgtatccacatttgcgaacgttgcggtttgacggcacaggccaatctcaagaagatgacg tacgaatgccgcagcccgatgtgtgtgggtcgtccgacgcaaatttgccaggtcgagatc ccgtacgcggccaagctactgctacaggaactcaactccatgtgcattcaaaccagaatt tataccaagaacgtgacgacaagggataattcgtattaa

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