KEGG   Phaeodactylum tricornutum: PHATRDRAFT_11593
Entry
PHATRDRAFT_11593  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K12862  pleiotropic regulator 1
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHATRDRAFT_11593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pti03041]
    PHATRDRAFT_11593
   03400 DNA repair and recombination proteins [BR:pti03400]
    PHATRDRAFT_11593
Spliceosome [BR:pti03041]
 Complex B
  Other components
   Prp19 complex
    PHATRDRAFT_11593
 Complex C
   Prp19-CDC5 complex
    PHATRDRAFT_11593
DNA repair and recombination proteins [BR:pti03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    PHATRDRAFT_11593
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_RIG_1st Beta-prop_WDR11_2nd Beta-prop_WDR19_1st PQQ_3
Other DBs
NCBI-GeneID: 7200288
NCBI-ProteinID: XP_002179366
JGI: 11593
UniProt: B7FWD8
LinkDB
Position
6:complement(128946..129917)
AA seq 324 aa
PTPQWHAPWKLSTVLSSHLGWVRCIAMDPENRLFATGAADRVIKIWNFPKASVGASDALQ
LTLTGHISPVRGLEFSPKHPYLFSCAEDKTVKCWDLETNQVIRHYHGHLSGVFCLALHPT
LDVLVTGGRDAVARVWDMRTKTQIHTLAGHEHTVASVLTQSTNPQIITGSHDCTVKLWDL
VAGKCMTTLTHHQKSVRALAAPSFEKTFVSGAADGLKRWQSKDGRFLQTMTGHKAVVNAL
AVNDDGVLVSGGDDGSLHFWDYKTGYGFQQTRSVVQPGSLEAENGVMACCFDATGSRLIT
GETDKTVKIWKPDETASELTHPID
NT seq 972 nt   +upstreamnt  +downstreamnt
ccgactccgcaatggcatgctccgtggaaactatcgaccgtcctgtcctcgcacttgggt
tgggtgcgctgcatcgccatggatccggaaaatcgtttgttcgccaccggtgccgcggat
cgcgttatcaagatctggaacttccccaaagccagtgtcggagcctcggatgccttgcaa
ctcactttgacgggacacatttcccccgtccggggactcgaatttagtcccaaacatccc
tacttgttcagttgtgccgaggacaagacggtgaaatgttgggatctggaaacaaaccag
gtaattcgacattatcacggtcacttgtcgggagtcttttgcttggcgttgcatccaacg
ttggacgttctcgtgacggggggacgcgatgctgtggctcgcgtttgggacatgcggacc
aagacgcagatccacaccctggcgggacacgaacacaccgtcgcttccgtactgacccaa
tccactaatccacaaatcattaccggttcgcacgattgtaccgtcaaattgtgggatttg
gtcgccggcaagtgtatgaccacgctgacgcatcaccaaaagtcggtgcgggctttggcg
gctccgtcgttcgaaaagacctttgttagtggcgccgccgacggattgaagcggtggcag
agtaaggatggtcggtttctgcaaacaatgacgggtcacaaggccgtagtgaatgcacta
gccgttaatgacgatggagtcctggtatccggtggggacgacggatccttgcatttttgg
gattacaaaacgggttacggcttccaacaaacacggagtgtggttcaacccggatcgctg
gaagcggaaaacggtgtcatggcgtgctgtttcgatgcgacggggagtcggctaattacc
ggcgaaaccgacaagaccgtcaagatttggaaaccggacgaaacggcttcggaattaacg
catcccatcgac

DBGET integrated database retrieval system