Phaeodactylum tricornutum: PHATRDRAFT_11894
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Entry
PHATRDRAFT_11894 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_11894
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PHATRDRAFT_11894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltr_RsmB-F
Methyltrans_Mon_2nd
Methyltransf_23
Methyltransf_31
HEAT_PSME4
TPR_DOCK
Motif
Other DBs
NCBI-GeneID:
7200686
NCBI-ProteinID:
XP_002179598
JGI:
11894
UniProt:
B7FXQ7
LinkDB
All DBs
Position
7:183290..183916
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AA seq
209 aa
AA seq
DB search
YSQVAKEQGLRSRAAFKLTQINRKYPVLEKAQNAVLDLCAAPGGWTQVAARTCNKSVPII
AVDILPIRSFANAQNITTLIGDITTDKCKSDIKHALQGRPVDVVLHDGAPNIGADYGKDA
YEQNEIALHALRCATQHLVKGGTFITKVYRSRDYASFQWLLQQLFQGVQAFKPKASRAQS
AEIFLVCEKYKAPSKLDPRLLDPKHVFEA
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
tactctcaagtggccaaagagcaaggcctacgatcgcgtgcggctttcaagctaacccag
attaaccgaaagtaccctgttttggaaaaggctcagaatgcggttttagatttgtgtgca
gcacctggtggttggacgcaggttgcggcgcgtacctgcaacaagtcagtccccatcatc
gccgtcgatatcttgcccattcggagttttgcgaatgcgcagaatattacgaccttgatt
ggtgacattaccacggacaagtgcaagtccgatatcaaacatgcgcttcagggaagacca
gtggatgttgtcttgcacgatggagctcccaatattggtgccgattacggaaaggatgcc
tacgaacagaacgaaattgccctgcacgcattgcggtgtgcgacacagcatttagtcaag
ggtgggacttttattaccaaagtgtatcgctcgcgtgattacgcatcgtttcaatggtta
ctgcagcagctatttcaaggtgtacaagccttcaagcccaaagctagtcgtgcccagtcg
gccgaaatctttttggtctgtgaaaaatacaaggcacccagcaaacttgacccacgtttg
ttagatcctaagcatgtctttgaagcc
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