Phaeodactylum tricornutum: PHATRDRAFT_12234
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Entry
PHATRDRAFT_12234 CDS
T01075
Name
(RefSeq) GABAR1 G protein-coupled GABA receptor
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PHATRDRAFT_12234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATRDRAFT_12234
Enzymes [BR:
pti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PHATRDRAFT_12234
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
PHATRDRAFT_12234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
NTP_transf_2
MTPAP-like_central
ATP13
Motif
Other DBs
NCBI-GeneID:
7200397
NCBI-ProteinID:
XP_002179712
JGI:
12234
UniProt:
B7FYC1
LinkDB
All DBs
Position
7:<771526..>772879
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AA seq
336 aa
AA seq
DB search
RERVLNRMGELCRDWIRTVCIKKGLSTDVVNVAGGQLFTSGSYRLGVHEPGADIDTILVS
PNACQRMDFFGTTILSTVEGEEGTRDPTSLAERIRTHPDVTNFVPVESAAVPILTFDWEG
INIDLLFARLNTASVPPDFDIDNDAVLDGADGATEKSLNGPRVTNLIAALVSGTPQRYQV
FLTVVRCVRKWAKARGLYSNKMGYWGGVNINIGVALVVQLYPNACGASLLRKFFLVFKTW
RWPQPLLLTKPHDAGYGLPVWSVATAVRQVAPMITPAYPAMNSTLAVSRQTLQILQEEFN
RGHTVVDQLWKDYQKNPAQELNWNTLFEPSDFFINY
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
cgcgaaagggtactcaaccgcatgggtgagctgtgtagggactggattcgaactgtctgc
ataaagaaaggcttgtcgacggacgtagtgaacgtggcgggtgggcagttgttcacgtct
ggatcataccgactgggtgtacacgaacctggtgccgatattgataccattctcgtctca
ccgaacgcgtgtcagcgaatggatttttttggaaccacgatactctcaaccgtagaagga
gaagaaggcactcgcgatccaaccagtctcgccgaacgaattcgaacacacccagacgtg
acgaattttgttcctgtcgaatctgctgccgtccccattctgacttttgattgggaagga
attaacatcgatttgttatttgctcgtctcaatacagcgtcggttccccctgactttgat
attgataacgacgccgttttggacggcgccgacggggcgacggaaaagtcgctcaatggt
ccgcgggtcaccaacctcattgctgccctcgtgtcgggcacaccccaacggtatcaagta
tttctaactgttgttcggtgcgttcgtaagtgggccaaggcccgaggcctctacagcaac
aaaatgggctactggggaggcgtgaatatcaatattggtgtcgcactcgtcgtacagctg
taccccaacgcgtgcggagccagcctcctgcgtaaatttttcctcgtttttaagacatgg
cgctggccgcagccactattactcacgaaaccgcacgacgcgggctacggtctgccggtc
tggagcgtggcgacggcagtgcgccaggtagctccaatgatcactccagcctatcctgct
atgaattcgactctcgccgtgtcgcgacagacgttgcaaattctacaggaagaattcaac
cgtggccacacagttgtagaccaactatggaaagattaccaaaagaatccggcacaggag
ttgaactggaataccttgttcgaaccgtctgatttttttattaactat
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