KEGG   Phaeodactylum tricornutum: PHATRDRAFT_12322
Entry
PHATRDRAFT_12322  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K12587  exosome complex component MTR3
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PHATRDRAFT_12322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pti03019]
    PHATRDRAFT_12322
Messenger RNA biogenesis [BR:pti03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     PHATRDRAFT_12322
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 7201091
NCBI-ProteinID: XP_002180237
JGI: 12322
UniProt: B7FYW1
LinkDB
Position
8:complement(<445968..>446687)
AA seq 212 aa
VLEAAQGSALVELGHTKVIGQVLGPVTASSSHLPPSLQLNMEEGVMHFELLSTGKINSWT
IARETDLASNLSDALSASVPLRQYPKCALLVKITVLQDDGSILPACITAATLALADASVE
MYDVVAASTVAVCDGLLVADPTLREVSAADAVMTLAILPNWKESTLWQQSGRLNPQRANE
AMELCRNGCRTMHRFLREHLIQENEKDMAHES
NT seq 639 nt   +upstreamnt  +downstreamnt
gtcttagaggcagcacaaggatccgcgctggtagagctggggcatacgaaagtgattggg
caggttctcggacctgttacggccagctcgagccacctgccgccttcccttcaattgaac
atggaagaaggagtcatgcacttcgaacttctgtccactggaaaaatcaattcatggact
attgccagagaaaccgacttggcttccaacctctccgatgcgctatccgcctcggttccg
ttgagacagtatcccaaatgcgcccttttggttaaaattacggtgctacaggatgatggg
agcatactaccagcatgtattactgcggctactttggcattggctgatgcctctgtggaa
atgtacgatgttgtagccgctagtactgttgccgtatgcgatggtttgctagtagcagac
cccacgctgcgcgaggtatcggcggcggatgccgtcatgacgctggccattttacccaac
tggaaggaatcgactctgtggcaacagtctggacgcttgaatccgcaaagggcaaacgaa
gccatggagttgtgtcgaaacggttgtcgaacgatgcatcggtttttgcgggagcacctt
attcaagaaaacgagaaagacatggcacatgagtcttga

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