Phaeodactylum tricornutum: PHATRDRAFT_12752
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Entry
PHATRDRAFT_12752 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PHATRDRAFT_12752
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pti01002
]
PHATRDRAFT_12752
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_12752
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_12752
Enzymes [BR:
pti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
PHATRDRAFT_12752
Peptidases and inhibitors [BR:
pti01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
PHATRDRAFT_12752
Membrane trafficking [BR:
pti04131
]
Endosome - Lysosome transport
Others
Others
PHATRDRAFT_12752
Ubiquitin system [BR:
pti04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
PHATRDRAFT_12752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
7201344
NCBI-ProteinID:
XP_002180407
JGI:
12752
UniProt:
B7G036
LinkDB
All DBs
Position
9:294656..295699
Genome browser
AA seq
348 aa
AA seq
DB search
GVVGLRNLGNTCFLNSSLQCLSATIPLTDYFLGYDYRSEINQHNVLGTGGKLATAYAELM
KELWLQAAPVSGYTKISARVVKPTRFKSSLESFAPQFLGTSQHDAQELLSFLLDGIHEDL
NRIPKKPYIEDRDCDGTHDERDAIEAWKNYLRRDKSLVVDIFQGQLRNTLTCLTCRHVNV
RFEPFMYLSLPLNDDSHTLDDCLRLYLAEERLVRENQWYCSVCQTHRDATKKTDLWIVPA
ILIVHLKRFKFNEYGQLGSKNNACIRYPVGDSWDLSGVVCSRGSEEPLYDLYAVSNHVGD
LGGGHYTAYSLNRFDDHWYEFNDTTCRKIDDRTLQGNSSSAYLLFYNR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ggcgttgttggtctgagaaatcttgggaatacctgctttcttaacagtagtttgcagtgt
ttgagtgctactattccactcaccgactactttttgggttacgactaccgatccgaaatc
aaccagcacaacgttttgggaacggggggtaaactggcgacggcctacgcggaactcatg
aaagagctctggttacaggcggcccccgttagcggctacaccaaaatatcagcacgagta
gtcaaaccgacgcgattcaaaagcagtctcgagagtttcgccccacagtttctcggtacg
tcgcaacacgatgcccaagaattgctgtcctttttattggacggtattcacgaggacttg
aatcgcattcctaagaagccatatattgaagatcgagattgcgacggcactcatgatgag
cgtgatgcgattgaagcttggaaaaactacctgcgccgcgacaagtccctggtggtggac
atttttcaaggtcaactgcgcaataccttgacgtgcttgacctgccggcacgtcaacgtg
cgcttcgaacccttcatgtacctctcactcccattgaacgacgacagccacactctcgat
gattgtctgcgcctctatttagcggaagaacgattagttagagagaatcaatggtactgc
agcgtttgtcaaacgcaccgggacgctacgaaaaagaccgacttgtggatcgttccagct
attttgattgtccatctcaaacgctttaagttcaacgaatacggtcagctaggctcgaaa
aacaatgcttgtattaggtatcccgtgggtgactcatgggatttgtccggagtggtatgc
agtcgggggagcgaagaacccctctacgatttgtacgcagtttcaaaccacgtcggggat
ctgggtgggggacactatacggcatattcactcaatcgcttcgacgaccactggtacgaa
tttaacgataccacttgtcgcaagatcgatgatcgaacgctccaaggcaattcatcgtcg
gcctatttattattttacaatcgc
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