Phaeodactylum tricornutum: PHATRDRAFT_13643
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Entry
PHATRDRAFT_13643 CDS
T01075
Symbol
HCL1
Name
(RefSeq) hydroxymethylglutaryl-coenzyme A lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00280
Valine, leucine and isoleucine degradation
pti00650
Butanoate metabolism
pti01100
Metabolic pathways
pti04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PHATRDRAFT_13643 (HCL1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PHATRDRAFT_13643 (HCL1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PHATRDRAFT_13643 (HCL1)
Enzymes [BR:
pti01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
PHATRDRAFT_13643 (HCL1)
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
7202194
NCBI-ProteinID:
XP_002181269
JGI:
13643
UniProt:
B7G2V2
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All DBs
Position
12:823057..824108
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AA seq
321 aa
AA seq
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MHTVPTLLVPPRVKIVEVGPRDGLQNEPVSVSTEDKIKLVQKLAQAGCRYIEAGSFVSPK
WVPSMANSFQTMTKLREWKEKQGPEYEPLVLSCLVPNLAGLHQAIQVKAGEIAVFGSASE
TFSNKNINCSIDESLERFALVVAEANTARIPVRAYLSCVIGCPYQGRIPPLAVAQMAEKL
LALGCHELSLGDTIGVGTPTTTIALLKELQHVLGNDVDKLAVHFHDTHGQALANILVSLE
SGIATVDASVAGLGGCPYAPGASGNVATEDVVYMLNGLGVETGIDLDKLVEAGDFICEVL
DRPSRSRAGTAISAIQKRKAP
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcataccgtaccgacacttttggttccaccgcgagtcaaaattgtcgaagttgggccc
cgagacggcttacagaacgaacccgtcagcgtctccacggaggacaaaattaaactcgta
caaaagctggctcaggcgggctgtcgctacatcgaagctggaagtttcgtctcaccaaaa
tgggttcccagcatggcgaattcatttcaaacaatgactaagttaagagaatggaaagag
aagcaagggccagaatacgagccactggtcttgtcttgtctcgtgcctaatctcgcaggc
cttcaccaagcgattcaggtaaaggctggagagattgccgtatttggatctgcgagtgag
actttttccaacaagaacataaactgcagtattgacgagtcactggagcgcttcgcgctg
gtcgttgccgaggccaacaccgctagaattcccgtgcgagcctacttgtcctgtgtcatt
ggttgtccttaccaaggaaggatcccaccattagccgtagcccagatggcggaaaaatta
ttagctttgggctgtcacgaattgtcgttgggtgatacgattggggtcgggacacccaca
accacaatcgcgctgttgaaggaactgcaacacgtcctggggaacgacgtagacaaacta
gccgttcattttcacgacacacatggtcaagctttggctaacattttggtatccttggaa
agtgggatcgcgacggtcgatgcttccgttgcggggcttggaggttgtccgtatgcccct
ggagcgtcgggcaacgtggcgaccgaagatgttgtctacatgctgaatggtttgggtgtt
gagacggggattgatcttgacaagcttgtagaggctggtgacttcatttgcgaggttttg
gaccgcccttccagatctagggcagggacagccatttctgccatacagaagcggaaagca
ccgtag
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