Phaeodactylum tricornutum: PHATRDRAFT_13779
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Entry
PHATRDRAFT_13779 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K22399
pachytene checkpoint protein 2
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_13779
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
PHATRDRAFT_13779
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_TRIP13_C
AAA_16
AAA_22
NACHT
nSTAND3
AAA_5
NPHP3_N
AAA_33
AAA_11
TsaE
AAA_18
RuvB_N
AAA_24
Viral_helicase1
RNA_helicase
AAA_28
Sigma54_activat
AAA_14
AAA_2
AAA_30
Mg_chelatase
Rad17
bpMoxR
AAA_7
AAA_25
Rad51
AAA_19
TIP49
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
7201932
NCBI-ProteinID:
XP_002181231
JGI:
13779
UniProt:
B7G2M0
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All DBs
Position
12:585948..586862
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AA seq
304 aa
AA seq
DB search
LPHASLHGVYESLIFETDIGQDLLSFASSASLFADQHVQSHVVHWNRLLLLHGPPGTGKT
SLGRSLAHKLAIRTSARFPRANLLEIHSHSLFSKWFSTSGKLIHRVFELIRDMVQDDPSC
LVCVLIDEIESLAASRSALTSTGEPSDALRAVNSLLTSLDRLRSLPNVLVIATTNLTASV
DAAFLDRADLKIYIGLPCLQARYEILRSCLDELARVGILTISNPSSDALLAFRDIARSDE
SQPSTVLVSLAGMAEGLSGRSLRRLALQAHALFVRRPQASLTLFLSALQRTIEREIGSLP
SPLV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ctgccgcacgcatccctgcacggcgtctacgaatccctcatttttgaaaccgacattggc
caagatttactttctttcgcttcttcggcctcgttattcgccgaccaacacgtgcaaagc
cacgtggtgcactggaatcggcttttgctgctccacgggccgccgggtacgggtaagacc
agtttaggtcgctccctggcgcacaagctcgcgatacgtacttccgcacgatttccaaga
gccaacctgctcgagatccactcacattcgctcttttccaaatggttctccacgtccggt
aaacttattcatcgagtttttgagcttattcgagatatggtgcaggatgacccgtcctgt
ttggtttgtgtgttgattgacgagattgagagcctggcggcaagccggtcagctttgacc
agtactggggaaccgtcggatgcgctccgggccgtcaattctttgttgaccagcttggat
cgactacgatccttacccaatgtattggtgatcgccaccaccaacttgaccgcctccgtg
gatgccgcctttttggatcgcgccgatctcaaaatatacatcggattgccttgcctccaa
gcccgttacgaaattttgcgatcctgtttagacgaacttgcgcgggtcgggatactaaca
atatcgaatccttcttccgacgcattgcttgccttccgagacattgctcggtcggacgag
agccaaccgagcacggtattggtgtcgttggcggggatggccgagggcttgagcggacgc
agtttgcgtcggctggccttgcaagcacacgccctgtttgtccgtcgaccccaagcctcg
ctcacgctctttttgagcgcattgcagcgaaccatcgaacgagaaattggcagccttccg
tctccgctggtgtag
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