Phaeodactylum tricornutum: PHATRDRAFT_14161
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Entry
PHATRDRAFT_14161 CDS
T01075
Name
(RefSeq) helicase_3
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pti01009
]
PHATRDRAFT_14161
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_14161
Enzymes [BR:
pti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PHATRDRAFT_14161
Protein phosphatases and associated proteins [BR:
pti01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
PHATRDRAFT_14161
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
Pre-60S particles
Helicases
PHATRDRAFT_14161
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
7202750
NCBI-ProteinID:
XP_002181979
JGI:
14161
UniProt:
B7G4V3
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All DBs
Position
14:<805163..>806875
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AA seq
540 aa
AA seq
DB search
LERPTNVQSRAIPAFFTNQQLHNILLQSETGSGKTLAYLLPILQSLAVDKQGELRKLDRA
KAGTKCIILCPTRELASQTVKVVENLCSHSFNWLVPGCLLGEERRKSEKAKIRKGLSLVV
ATPGRLLDHLTRTESLLMALKGKLEWLVLDEADRLLDMGLGEQVKQIVQRIRSNQPGSGR
DGITWRSVLVSATVTPSIEKLAKETLLGGDNSWVWVKGGNDAQVAKVAAESEFSQSTPRQ
LAQFHMTVSAKLRLAALVGFLTQRADKGERTVVFMSTCASVNYHHALFEGMDSVLEESDS
DTGKGIFGTRCPIHRLHGSVPHSERHLVLRKFTKEQIVGGKKQAAVLLCTDVAARGLNLP
ECEWTVQYDPPSEVADYVHRAGRVARAGKAGHSLIFLLPSERTFLDVLKNRGVKHMSALS
LASTLNAAAAICGLGQSKLATSRRGEAFCTELHRRMENLIRTRAKPQEVSGQLLELARAA
FLSHLRAYPTKEKAVRHIFSAKALHLGHVARSFALKEPPKKLGTNSSQSAANQEDDSRKR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ctggaacggccaacgaacgttcaatccagagcaatacctgcatttttcactaaccaacag
ctgcacaatattctgttgcaatctgagacgggctcaggaaagacgctggcttacttgcta
cccatcctacaaagcttggctgtcgataagcaaggagaactccgcaagctagaccgagct
aaggcggggaccaaatgcatcattttgtgccccacccgtgaactcgcctcacaaacagta
aaagttgtcgagaacctctgtagtcattcgttcaactggcttgttccgggatgtcttttg
ggcgaagaacggcgcaagtcagaaaaggccaaaattcgaaaaggattgtctctcgttgtg
gcgacccctgggagattactcgaccacttgacacgaactgagtcattacttatggctctc
aaaggtaaattggagtggctagtgctggatgaagctgaccggctcctcgatatggggctt
ggtgagcaggtgaaacagatagtgcagcggattcggtcgaaccaacccggctctggcaga
gacggaattacttggcgttccgtcttggtgtccgcgacggttactccatcgattgaaaag
cttgccaaggagactcttttgggtggagacaactcttgggtctgggtaaagggaggaaat
gacgcccaagtcgccaaagttgcagccgagtccgaattttcccagtccacgccacggcaa
ttagctcaatttcacatgacagtcagcgcaaaattgcggttggcggcactggtaggattt
ctgacgcaacgtgctgacaagggcgaacggactgtggtttttatgagtacatgtgctagt
gtcaactatcatcatgctttgtttgaaggtatggattcggtactagaagagagcgattct
gacactgggaaaggcatattcggcacccgttgtcctattcatcgtttgcacggtagcgta
ccgcatagcgaaagacacctcgtcctccgcaaattcaccaaggaacaaattgttggtggc
aagaagcaagctgcagtattactctgtacggacgtcgcagcccgtggactcaacttgccg
gaatgcgaatggactgtgcagtatgaccccccaagcgaagtggccgactatgtgcatcga
gcaggtcgtgtcgctcgtgctggtaaagctggtcactctttaattttccttttgccttcg
gaacgcacgttcttggacgtgcttaagaatcgcggcgtcaagcacatgtcggctttgtcg
ttggcgtcgacgttgaatgcagctgccgcgatatgtgggcttggtcaatccaaactggct
acgagtcgcaggggcgaagccttttgtaccgaattgcatcgacggatggaaaacttgatc
cggacgcgtgcgaaaccccaagaagtatcaggccaactattagagctggctcgcgcggct
ttcctttcacatctgcgagcttatccaaccaaagaaaaagcagtgcgacatattttctcc
gccaaggcgctgcatctgggtcacgtagcgcgatcgtttgcgctgaaggagcctcctaaa
aagctcggcaccaattcgtcccagagcgccgcaaaccaagaggacgactcacgcaaacgc
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