Phaeodactylum tricornutum: PHATRDRAFT_14607
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Entry
PHATRDRAFT_14607 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03430
Mismatch repair
pti03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PHATRDRAFT_14607
03460 Fanconi anemia pathway
PHATRDRAFT_14607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pti03400
]
PHATRDRAFT_14607
DNA repair and recombination proteins [BR:
pti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
PHATRDRAFT_14607
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
7203237
NCBI-ProteinID:
XP_002182442
JGI:
14607
UniProt:
B7G5N0
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Position
15:complement(689366..690608)
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AA seq
337 aa
AA seq
DB search
MSAEIRPIDPESVQRIVAGQAVFDLSTALKELVDNALDAKSRTINIRLFNLGIDILEVSD
DGMGVPLASRPYLATPHATSKIRAFDEIYATASTLGFRGEALFCLANLSTNLIVATRTRD
EATAQKLEFRRDGSLRTDTVTSILKKVGTTVAVVGLMDALPVRRHDLIKGIQTQRRTMLR
MLEGYAIFSPGVGFRLMDMMDAGRGGESLLLATPQNSSSIEETVSATLGPKVLPFLCPIQ
VDLSTVLEAPTQSPRNSQYFAINGRPVELKQVSRVLNEAWRALGCKKRPFCALQFTLPNN
EYDINLSPDKRTVMLTHEPQICALVRDAVVELWASQT
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgagatacgaccgatcgatcccgagtcggtccagaggattgttgcgggacaa
gcggtctttgatctgtccacggccctcaaggaattggtggacaacgctctggatgccaag
agtcgcaccatcaacatccgtctgttcaatctgggcattgacatattggaagtatcggac
gatggcatgggtgttccactcgcctcccgtccatacttggccacgccgcacgcaacgagt
aaaatacgagcctttgacgaaatctacgccacggcatcgactctgggctttcgtggcgaa
gcgctcttttgcctcgccaacctcagcaccaacctcatcgtggccacccgcacccgcgac
gaagccacggcgcagaaactcgaattccgtcgggacggatcgctacggacagacaccgtg
acgagtatactcaaaaaggtcgggacgaccgttgcagtcgttggtttgatggacgccttg
ccggttcgtcgacacgatttgattaaaggcattcagacacaacgacggaccatgctacgc
atgctggaaggctacgccatcttctctcccggagtcggctttcgtttgatggacatgatg
gatgcgggacggggaggagaatcgctcttactagcgaccccgcagaatagctcgtccatc
gaagaaaccgtgtcggcgacactgggacccaaagtcttgccctttctgtgtcccattcag
gtcgacttgtcgaccgtcctagaggcaccgacacaatcaccacggaactctcaatacttt
gccatcaacggacgccccgtcgagttgaaacaagtgtccagggtcttgaacgaggcttgg
agggcgttggggtgcaaaaaacgtcccttttgtgcactgcaattcacactccccaacaac
gaatacgacattaacctgtcgcccgacaaacggaccgtcatgctgacgcacgaaccacaa
atatgcgctctggttcgagacgccgtggtcgaactctgggccagtcaaacc
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