Phaeodactylum tricornutum: PHATRDRAFT_15481
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Entry
PHATRDRAFT_15481 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_15481
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PHATRDRAFT_15481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_IP5PC_F
Beta-prop_WDR75_1st
FTZ
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
7195078
NCBI-ProteinID:
XP_002183470
JGI:
15481
UniProt:
B7G8H6
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Position
19:complement(352448..353896)
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AA seq
482 aa
AA seq
DB search
AVKAAEAADILQTDQAGLLEPENDMERTTSLTQTELKRNYLDDDTARHIYNLDMHQSAPY
GLEYDRSGRYNIMYGAAGHLAMMDCHQQSLVTEFYVQERIRDACFLHNFTLFAAAQKNHA
FIYDQTGAEVHRLSDHSDPMALQFLPYHWLLASVGRAGWLKYQDTSTGALVSQHRTQLGA
CRVLRQNPTNAILHAGHSNGTVTLWSPAQGKYLAKLLCHKGAAVHSLAVDPTGQVMVTGG
ADRRIRIWDLRMYKETISYFVRGGVPTSIDISQRGLLAVGHAGQTTIWNADALHRKTQDP
YMHHSMPRCGPVETVRFRPFEDVLGIGHSRGVSSIVVPGAGEPSVDTSEYNTNPHQDAKQ
RKEAEVRALLDKLQPEMIALDPDQVGGIEESDPHKRLERLQDLQEEANHNKKAPKKEKSK
KRGRSKIQTKLRRKHKNVVDQNTLKLREAREKEKVAKATEIRGEIASEAPREQAPSALKR
FF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gctgtcaaggcggcggaggcagccgacattctccagacagaccaagctgggttgctggaa
cccgaaaacgatatggaacgtactacatccttgactcagacggagctcaagcgcaattat
ctcgatgatgacacggctcgccatatttacaatcttgatatgcatcaatcagctccatac
ggattagaatatgaccgcagtggtcgttacaacatcatgtacggtgccgctgggcacttg
gcaatgatggattgtcaccaacagtccctagtgacggaattttacgtgcaagaacgaatt
cgggacgcctgcttcctgcacaatttcacgctctttgccgccgctcagaagaatcatgcg
ttcatttatgatcagactggagccgaagtacaccgcctctccgatcattcagatcccatg
gccctgcaatttttaccctaccactggttgttggcctcggtgggccgcgccggttggctt
aagtatcaggatacgagtacgggtgcgttagtatcgcaacatcgtacgcagctcggtgcg
tgtcgcgtattgcgacaaaaccccaccaatgccattctgcacgcgggtcactcgaatggt
accgtcacactatggagtccggcacagggaaagtatctggcgaagcttttatgtcacaag
ggcgccgcagtccatagtctcgcggtggatcccactggacaagtgatggtgacgggtggg
gcggatcgccggatacgaatctgggacctgcgcatgtataaggaaacgatctcgtatttt
gtccgcggcggagttccgacgagcatagatatttctcaaaggggcttgttggcagtgggg
cacgccgggcaaacaacaatttggaatgccgatgcactgcatcgtaagactcaggatcca
tacatgcaccacagcatgccgcgttgtgggccggtggagacagtgcgcttccgaccgttt
gaagatgttttgggtatcggacactcgcgaggtgtaagtagtattgttgtacccggggct
ggtgaaccgtctgtggacacctcggaatataataccaacccccatcaggatgctaagcaa
cgtaaggaggctgaagtacgggcgttgctcgataaattacagccagaaatgattgccttg
gatccggatcaggttgggggtattgaagaatccgacccgcacaagagattggaacgatta
caagatctgcaagaagaagccaatcacaacaaaaaagcacctaaaaaagaaaaatccaag
aaacggggtagaagcaagattcagaccaagttgcgacgcaaacacaagaatgtggttgat
cagaatacgctcaagttgcgagaggctcgagaaaaagaaaaggtagccaaagcgactgag
atcagaggtgaaattgcgtcagaagcaccgagagaacaagcaccgtcggcgttgaaacgc
ttcttttaa
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