Phaeodactylum tricornutum: PHATRDRAFT_15555 Help Entry PHATRDRAFT_15555  CDS       T01075                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism pti  Phaeodactylum tricornutum Pathway pti03020   RNA polymerase pti03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:pti00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     PHATRDRAFT_15555   09124 Replication and repair    03420 Nucleotide excision repair     PHATRDRAFT_15555  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pti03021]     PHATRDRAFT_15555    03400 DNA repair and recombination proteins [BR:pti03400]     PHATRDRAFT_15555 Enzymes [BR:pti01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      PHATRDRAFT_15555 Transcription machinery [BR:pti03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      PHATRDRAFT_15555 DNA repair and recombination proteins [BR:pti03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       PHATRDRAFT_15555 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_R RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  7195330 NCBI-ProteinID:  XP_002183777 JGI:  15555 UniProt:  B7G9I2 LinkDB All DBs Position 20:complement(<605183..>610303) Genome browser AA seq 1706 aa AA seqDB search ETQVNGQPVYGGANDPRLGNLHDKSDPGYFGHLDLAKPVYHQGFFNTTLRALRCVCFHCS RLRMLPDEFKFQKAIQIKSRKRRLEALHESLRGKKKCDHCQGVQPKYTKVDLHVEADFPE DGMHGSTGGGGDSKQFLSGDTVVKIFKQIREEDIVLLGLDVQHARPDWLLVQVLPVPPLH VRPSVTVGGGTQSSEDDLTHQLVNVIKSNLSLQQAVSNGEPQIVVEQFELALQHNVAAFM DNELRGMPQVTQRSGRPLKTITQRLKGKEGRIRGNLMGKRVDFSARTVITADPNLGIHQV GVPRSVAMNLTVPIRVTAFNQAELSALVANGPTMHPGAKHIIRSDGTRIDLRYVKNKSEL LLAHGWIVERHLRDDDIVLFNRQPSLHKMSIMGHKAKVLDWSTFRLNLSCTSPYNADFDG DEMNLHVPQGLAARAEAELMMLSSRVIVSGQSNRPVMSIVQDSLLATQKMTKRSVFIEKD LCYNMLMWVPQWNGQIPIPAVIKPKELWTGKQLLSTILPKVNLKSKANNGPGKDARGKNM PNTFNMYDHLVTIQDGELLEGTVDKKTIGSSMGGLIHTAWLDVGFEETARFMNQIQQLVN HWILQYSFSIGAIDAVADADTMRQIESTIDKAKRQVQDLVRQGQLGELEIQPGRTMIESF EQLVNKVLNTARDHAGKSAQSSLDETNSVKAMVTAGSKGSFINISQIIACVGQQNVEGKR IPYGFKKRTLPHFSKDDIGSESRGFVENSYLRGLSPQEFFFHAMGGREGLIDTACKTAET GYIQRRLVKAMETVMARYDGTLRTSSGQIVQFLYGEDGMDAVWIEKQNFDSLTLAKPEFN KRFLFDTSSPEFGHDEQGIPFLEPDVIEECRRDPDIQATLDQEIEILREDQAILRIVMRS REAGRESDDSSYAPGNVRRVIHNAMRQFRIDKSKPTDLHPTEVIQIVNNLLERLIVVVGN DPLSVEAQSNATTLYRILIRTMLSSKRVLKDWRLSKAALNWVVGEIETRFNIAMVNPGEM AGVLAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVAKTPKTPGLTIYLQEE VSGDEKVAEQVVAMLEFTVLGDVVKKTEIYYDPDVKNTVVTKDREFVKEFYDFTDKTDDD LRRMSPWVLRVELDKPLLYVKKIKMEEIAKEIGEEYGADLNVEVTDDNADEMVVRIRIVN DTPFNSGQTDEGGNLMDDQPEVGQEDDIFLKRLEKSMLSSLKLRGVDHVKKVFMRGGAKR TVWDDVKGFGVRDEWVLETDGTNLMAVLGVDYVDGTRSVSNDIVEVFVALGIEGVRGALL SELRNVISFDGSYVNYRHLACLVDVMTMQGHLMAIDRHGINRVDTGPLLRASFEETVDML MDAAVYAEEEILKGVTENIMMGQLARVGTGDVDLLLDEDKVVREAVEVVVDEFAVDKDLG MAGVGGVGGATPYATTPFAASPMVGDGAAASPFVDGGAAFSPAVGAASFSPAYSPDSGSY GSGFASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYS PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP TSPAYSPTSPAYSPSGGDDKKDEMED NT seq 5121 nt NT seq  +upstreamnt  +downstreamnt gaaacacaggtcaacggccaacccgtatacggtggagccaacgacccgcgtttgggcaat ctacacgacaagtccgatccgggatactttggacacttggatttggccaaaccagtgtat caccagggatttttcaacaccacgttgcgggcactccggtgcgtctgttttcactgttcc cgactccgcatgctcccggacgaattcaagttccaaaaggccatacagatcaaatcgcgc aaacgccgactcgaagctctgcacgaatcactccgcgggaagaaaaaatgcgatcactgt caaggtgtacaacccaaatacaccaaggtggatctgcacgtcgaagcggactttcccgaa gacggaatgcacggaagtaccgggggcggaggggattccaaacaattcttgtccggggac accgtggtcaagatattcaagcaaattcgggaagaagatattgtgttgttgggtttggat gtccagcacgcgcgaccggattggttgctggtgcaggtattgcccgtcccgcccctacac gttcgacccagcgttactgtcgggggtggtacgcaatcgtccgaagacgatttgacgcat caactcgtcaacgttattaaatcgaatctctcgttgcagcaggccgtctccaacggtgaa ccccaaattgtggtggaacagttcgaactggccctgcaacacaacgtcgccgcctttatg gacaatgaactacgaggcatgccgcaagtcactcaacgcagtggacgaccccttaaaacc attacgcaacgtctcaaaggcaaggaagggcgaattcggggaaatctcatgggaaagcgg gtcgacttttccgcgcgtaccgtgattacggccgatcccaatctcggtattcatcaagtc ggtgtgccccggagtgtcgccatgaacttgactgtcccgattcgcgtgacggccttcaat caagccgaacttagcgccctcgtggccaacggccccaccatgcatcccggggccaagcac attatccgatcggacggaacgcggatcgatctgcgttacgtcaaaaacaaatcggaactt ctcctggcccacggctggattgtggaacggcatttgcgtgacgacgatatcgtgttgttc aatcggcagcccagtctacacaagatgagtatcatgggacacaaggccaaggtactggat tggagtacttttcgattgaatttgtcgtgtacgagtccgtacaatgccgatttcgacggc gacgaaatgaaccttcacgtgcctcagggattggcggctcgtgctgaagcggaactcatg atgttgagctcccgggttattgtctcgggtcaatcgaatcgaccagtcatgagtattgtt caggacagtttgttggcgactcaaaaaatgacgaaacggtcggttttcatcgaaaaggat ttatgctacaatatgctcatgtgggtgccgcagtggaacgggcagattcccattcctgcc gtgatcaaaccaaaggaattgtggaccggtaagcaattgctcagtacaatcctgcccaag gtgaatctcaagtccaaggcaaacaatggccccggaaaagatgctcgtggcaagaacatg ccgaatacgttcaacatgtacgatcatttggtgacgattcaggatggtgaactgttggag ggtacagttgataagaagacaatcggcagctccatgggtggcttgatccacacggcttgg ttagacgttgggtttgaagaaacggctcgttttatgaatcaaattcagcagctagtcaat cattggattttgcagtactcgttttccattggagcgatcgatgccgtcgccgatgcagat actatgcgacagattgagtcgaccattgacaaggcaaagcggcaggtgcaagatttggtt cgccaagggcaattgggagaacttgagattcaacccggtcgtaccatgatcgagtcgttt gaacagctcgtcaacaaggtgctgaacacggctcgtgatcacgccggaaaatctgcacaa tcttctttggacgaaacaaactcggtcaaggccatggtgacggctggttccaaaggttca tttattaatatttcgcaaattattgcctgcgtggggcagcagaacgtggaaggcaaacgc ataccgtacggtttcaagaaacgaaccctaccgcacttctccaaggatgatatcggctcc gagtcccgaggctttgtcgagaattcgtatttgcgtggtctgtctcctcaggaatttttc ttccacgcgatgggtggacgggaaggtttgatcgatacggcttgcaagaccgccgaaacc ggatacattcaacgtcgcctggtcaaggcaatggaaaccgtcatggcgcgttatgatgga actttgcgaacgagcagtggacagattgttcaatttttgtacggagaggatggcatggac gcggtctggattgaaaagcaaaattttgactctttgacgctggcaaagccagagttcaac aagcgtttcttattcgacacatccagcccagagttcggacacgatgagcaaggtattccg tttctggaaccagacgtaattgaggagtgtcgtcgcgaccctgatatccaggctactttg gatcaagaaattgagattcttcgggaagatcaagcaattctccgaattgtcatgcgcagc cgagaagctgggagagagagcgacgacagctcatacgcaccaggcaatgtgcgtcgtgtg attcacaacgcaatgcgtcaatttcgtatcgacaagagcaagccaacggacctgcatccc acagaagtgatacagattgttaacaacctgttggagcgtctgattgtagtggttgggaac gacccgctaagtgttgaagcgcagtcaaacgcaaccactctttaccgcattctgattcga accatgctttcgagcaagcgtgtcttaaaggactggcgtttgagcaaggctgctttgaac tgggtggtaggcgaaattgaaactagattcaatattgctatggttaatcctggtgaaatg gctggagtattggccgctcagagtattggtgagcctgcaacccagatgacgctcaacacc ttccattatgctggtgtttccgccaagaacgtgacgctgggtgtccctcgactgaaagaa atcatcaatgttgctaaaactccaaagactcctggcctaactatttatcttcaggaagag gtcagtggtgacgaaaaagttgccgagcaggtcgttgctatgctggaatttactgttttg ggcgacgttgtaaagaagacagaaatttattacgatcctgacgtgaaaaatacggttgtc actaaggatcgggagttcgtcaaggaattctatgactttacggataagacagacgatgat ttgcgtcgcatgagtccttgggttcttcgtgttgagcttgacaaaccgctactttatgtc aagaaaattaagatggaggaaatcgctaaagagattggggaagaatacggtgcggatctg aacgtagaagtgacagacgacaacgccgacgaaatggtcgtccggattcgaatcgtgaac gatacgccgttcaactcaggccaaacagatgaaggcggaaatttgatggacgatcaaccg gaagttggccaagaagacgatattttcttgaaacgtctagaaaaaagcatgctttcgagt ctgaagcttcgcggggtagaccatgtgaagaaagtgtttatgcgcggtggtgcgaaacgt acagtttgggacgatgtaaaaggtttcggcgttagagatgagtgggtactagaaacggat gggacaaacttgatggcagttcttggcgtggactacgtggatggtacgagatctgtcagt aatgacatcgtcgaggtgttcgtagcgcttggcattgaaggagtccgcggagcgttgtta agtgagcttcgcaacgtcattagtttcgacggttcttacgtaaactatcgccatttggct tgtctggtggatgtcatgacaatgcaggggcacttaatggctattgatcgccacggcatc aatcgagtcgacactggtccattgctccgagcttcattcgaggaaacggttgatatgctc atggatgcagctgtgtacgctgaggaggagattcttaagggcgtgaccgaaaacatcatg atgggtcagcttgctcgagttggcaccggtgatgtagacttactactggatgaagacaaa gttgttcgagaagcagttgaagttgttgtggacgagtttgctgtcgacaaagatctcggt atggccggagtggggggtgtaggaggagcgaccccttatgccaccactccatttgccgct agcccaatggtgggggatggcgcagcagcgtctccttttgtggatggcggagccgctttt tctccagcagttggtgcggcaagtttctcaccggcttattctccagacagcggtagttat ggttctggatttgcgagtggaagttacggagctggcgacagcccagcgtacagtccgacg tctccgcagtattcgccgacttctccggcgtacagccccacgtctccagcatattcgccc acaagcccagcatacagccctaccagtccagcgtacagtccaacgtcacctgcatattcg ccaacaagtccggcctacagcccaacttcgcctgcgtattcaccaacgagccccgcatat tcgccaacgtccccggcttacagcccgacgtcgccggcatatagtccgacgagtcccgca tattcgccaacgtcgcctgcgtattctccaacgagcccagcttacagcccaacttcaccg gcctacagccctacatctccagcatacagtccgacttcaccggcttactcacccacctcg ccagcttacagtcctacgtctccggcttattctccgacgtctcccgcgtacagtcctaca tcccccgcgtactcgccgacatctccggcctattcgccaacatcccccgcatattcgccg acctcgccagcctattcaccgacctcgccggcctactcaccgtcgggtggcgatgataag aaagacgaaatggaagactaa

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