Phaeodactylum tricornutum: PHATRDRAFT_16162
Help
Entry
PHATRDRAFT_16162 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_16162
Enzymes [BR:
pti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PHATRDRAFT_16162
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PHATRDRAFT_16162
Prokaryotic type
PHATRDRAFT_16162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-GeneID:
7198345
NCBI-ProteinID:
XP_002184584
JGI:
16162
UniProt:
B7GBT6
LinkDB
All DBs
Position
24:complement(194615..195921)
Genome browser
AA seq
284 aa
AA seq
DB search
MSNFQGGTWLFDVGECTQLQIQKTSSIKPSKITKIFLTHAHGDHSFGLPGLLCLMGQDRD
RENSPPVEIYGPEGLRMWLRVAIRYSGGRNIYPQYDHPLCADGAPMWEIEDEEDVKVYAA
PMSHGIPCLGYVVDELPRPGRLRNEVVEPIVKRNVQALREAGFTVPMKAMAVLKNLPPGN
AFTFPDGTVVQQEDAVEPPREGRKVVIGGDTADCRALRNLAQNADLVIHEATNCYLQGVD
KDTDVREVTRDAVMHGHSTPQIAGDFARSVNAKRLVLNHFSARY
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattttcaaggcggcacctggctctttgatgtgggtgaatgtacacagttacaa
atacaaaagacgtcgtctatcaaaccaagcaaaatcacgaaaatttttctgactcacgcc
cacggggatcattcgttcggactaccgggacttctgtgtttaatggggcaagatcgcgat
cgggaaaatagtccaccagtcgagatttacggtcccgaaggcctgcgcatgtggttgcgt
gttgccattcgctattctggtggacgtaatatatatcctcaatacgaccatcctctttgc
gccgacggcgcgcctatgtgggaaattgaagacgaggaagacgtcaaagtatacgcagca
cccatgagtcacggcattccttgcttgggctatgttgtggatgagttgccacgtccgggt
cgcttacgcaacgaggtagttgaacccattgtcaagcgtaatgtacaagcgctacgagaa
gctggttttaccgttccgatgaaggctatggcggtactcaagaatttaccacccggaaac
gcgtttacgttccccgatggtaccgtcgtgcagcaagaagacgcggtcgaaccgccacgg
gaaggccgtaaagttgtgattggcggcgacacggccgattgtagggccttacgcaatctt
gcccagaacgccgacttggtaatacacgaagccaccaactgttatctccaaggagtcgat
aaggacacggacgtacgtgaagtcactcgagatgccgtgatgcacgggcattcgacacca
cagattgccggcgactttgcccgatccgtcaacgctaagcgactagtcttgaaccacttt
tcggctaggtac
DBGET
integrated database retrieval system
