Phaeodactylum tricornutum: PHATRDRAFT_16891
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Entry
PHATRDRAFT_16891 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K12400
AP-4 complex subunit epsilon-1
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
PHATRDRAFT_16891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_16891
Membrane trafficking [BR:
pti04131
]
Endosome - Golgi transport
Others
AP-4 complex
PHATRDRAFT_16891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
HEAT_EZ
INTS1_R4
MMS19_N
Motif
Other DBs
NCBI-GeneID:
7199152
NCBI-ProteinID:
XP_002185337
JGI:
16891
UniProt:
B7GDY1
LinkDB
All DBs
Position
29:complement(186197..187546)
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AA seq
450 aa
AA seq
DB search
MATGGMSLSKEFFELLKAIGESKSKQEEDRIVQKEVTRLKSKLENTPGNPYHSNTLLTSK
KRAKEFLVRLLYVEMLGHDGSFGYIKAVEMAASASLFHKRTGYLVCGACLPPSHEFRFML
VNQMQRDLQSTNVLECSGGLLACTNLITADMVPAVANEVSKLLQHDSATIRKKAILCLHR
CHQLADDVVTSESLHESLRKLVCDKDPSVMGSSLNVIEALSLTNTAPFKDLVPSLVSILK
QICEHRLPSEFDYHRVPAPWMQLKLVRILGLLGKADMPASKGMYEILHETLRKADTGINA
GYAIVYECVITIIAIYPNANLLDAAAEAIARFMQSRSHNLKYLGVTGLAMIVEQHPQYAA
QHQLAVMDCLEDDDETLQRKTLDLLYRMTNVVNVEFIAEKLVEFLRHTTDLFLKQTLTTR
VCSIAERYAPNNAWYIRTITSLLEVSGDMV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggggggtatgagtctctccaaagaattcttcgaactcctcaaggccatcggc
gagtccaaatccaagcaggaagaagaccggatcgttcagaaagaagtgacgcgcttgaag
agcaaactcgaaaacacaccggggaatccttaccactccaatacgttgctcaccagcaag
aagcgcgccaaggagttcctggtgcgacttttgtacgtggaaatgctcggtcacgacgga
tcctttggatacatcaaggccgtcgaaatggccgcctcggcctcgctttttcacaagcgt
accggctatttggtctgtggcgcctgtctcccgccctcgcacgaattccgtttcatgctc
gtcaaccaaatgcaacgcgatctacagtccaccaacgtacttgaatgcagcggtggtctc
ctcgcctgtaccaaccttattacggctgatatggtccccgccgtcgccaacgaagttagt
aaactgctgcagcacgattcagcgaccattcgcaaaaaggcgattctctgtctgcatcga
tgtcaccaactcgcggatgacgttgttaccagcgaatctctgcacgaatcgctacggaaa
cttgtttgtgataaggacccttccgtgatggggagttcgctgaatgtcattgaggccttg
tctctcacgaataccgcgcctttcaaagacctggtcccctccctcgtttccattctcaaa
cagatttgtgaacaccggttgccttccgagtttgactaccaccgtgtcccggcgccgtgg
atgcaacttaaactcgtacgcattctgggtctcctcggcaaggccgacatgcccgcgagc
aaggggatgtacgaaattctacacgaaacgctgcgcaaggccgataccgggatcaatgcg
ggatacgcgattgtttacgaatgcgttattaccattattgccatttatcccaacgccaac
ctgttggacgccgcagccgaagccattgctcgcttcatgcagtctcgatcgcacaatctc
aagtacctaggagttaccggattagccatgattgtggaacagcatccacagtacgcggcg
cagcatcagttggccgtgatggattgcttggaagatgacgacgaaacgctacagcgaaag
acgctcgatctattgtaccgcatgacgaacgtagttaatgtggaatttatcgccgaaaag
ctggtggaattcttacgccacacgaccgatttattcctcaaacagaccttgacgacccgt
gtttgttccattgccgagcgctacgcccccaacaacgcctggtatattcgtaccattacc
tctctgttggaagtatctggagacatggtt
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