KEGG   Phaeodactylum tricornutum: PHATRDRAFT_17276
Entry
PHATRDRAFT_17276  CDS       T01075                                 
Symbol
Skp1_1
Name
(RefSeq) hypothetical protein
  KO
K03094  S-phase kinase-associated protein 1
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03083  Polycomb repressive complex
pti04120  Ubiquitin mediated proteolysis
pti04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    PHATRDRAFT_17276 (Skp1_1)
   04120 Ubiquitin mediated proteolysis
    PHATRDRAFT_17276 (Skp1_1)
  09126 Chromosome
   03083 Polycomb repressive complex
    PHATRDRAFT_17276 (Skp1_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pti04131]
    PHATRDRAFT_17276 (Skp1_1)
   04121 Ubiquitin system [BR:pti04121]
    PHATRDRAFT_17276 (Skp1_1)
   03036 Chromosome and associated proteins [BR:pti03036]
    PHATRDRAFT_17276 (Skp1_1)
Membrane trafficking [BR:pti04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    PHATRDRAFT_17276 (Skp1_1)
Ubiquitin system [BR:pti04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     PHATRDRAFT_17276 (Skp1_1)
   Cul7 complex
     PHATRDRAFT_17276 (Skp1_1)
Chromosome and associated proteins [BR:pti03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     PHATRDRAFT_17276 (Skp1_1)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     PHATRDRAFT_17276 (Skp1_1)
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB
Other DBs
NCBI-GeneID: 7196099
NCBI-ProteinID: XP_002176583
JGI: 17276
UniProt: B7FNR9
LinkDB
Position
1:426067..426905
AA seq 169 aa
MMDVEQETTVNLISKDGDSFSVPLAVAKMSELVKGMIDEDAEDEGDKIEIPLPNVKSQVL
NKVIEFCEHHLQEPMTEIEKPLKSQVMADVVQKWYADFVDVEQVLLFELILAANYMDIKP
LLDLTCATVAGMIKGKTPEDIRQTFGIQNDFSPEEEAQVREENKWCEEA
NT seq 510 nt   +upstreamnt  +downstreamnt
atgatggatgtcgagcaagaaacaacagtgaatcttatatctaaagacggagattccttt
tctgtcccccttgccgtcgctaagatgtcggagcttgtcaagggtatgatcgacgaggat
gctgaagacgaaggtgacaaaattgaaattccgctacccaatgtcaagtcgcaagttttg
aacaaggtaatcgaattctgcgaacaccatctacaggaacctatgacggaaattgaaaag
ccgctcaagtctcaagtcatggccgatgtggtccaaaaatggtatgccgattttgttgac
gtggagcaagtcttacttttcgagcttattctagcggcgaattacatggatattaaacct
ttgctggatctgacgtgcgcgactgtggctggcatgatcaaaggaaagacgccggaagac
attcgtcagacctttggaattcagaacgatttctcaccggaagaagaagcccaagtgcgc
gaggagaataaatggtgcgaagaagcctaa

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