Phaeodactylum tricornutum: PHATRDRAFT_17974
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Entry
PHATRDRAFT_17974 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_17974
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
90S particles
Other 90S particles
PHATRDRAFT_17974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_SCAP
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Cwf_Cwc_15
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_IFT122_1st
NET2A
VPS8_N
Beta-prop_IP5PC_F
Beta-prop_SPT8
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
7196969
NCBI-ProteinID:
XP_002177522
JGI:
17974
UniProt:
B7FR54
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Position
1:complement(2458046..2459706)
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AA seq
475 aa
AA seq
DB search
MAGPRSGSGRTRKSTLASRRNNSQPHTTHKRARPTLNLAASVDEHIDSDEEEHFEDRLEG
REPSLEDEQSEEEENVEAKRVRMAREYLERMDQQSDSDDTSDDDDNDNDSDQDDVQDDRV
ARKLQRVRLKREVAAITTPRQQAQAWIAAGHQRLLRGHDLTPTCVALQSDGATAISGSKD
HSVILWDIETASRKTHLCPVWKKETADSSKPRTVGEVLSVACSDDGRYAAVGSRDATVRV
FDIRCRSQALVQTFTGHKGAVTSLAFRTNSLQLFSGSDDRCIRHYNLSEMLYIETLYGHQ
FGVTDLDCHRDERPVSVGKDRTARAWKLAEDTHLIFRGGSKLPSASSVTVVKDDWFVTGH
EDGHLAMWKTDKKKAVAQIANAHGDDTEIVAVQALPGSDLVASGSYDGYVRFWKASTGRT
LAERGLQAVGEIPLFGYVNDIAFGPKARFCVAAVGQEHRLGRWNRVAQAKNRLAI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaccgagatccggttccggccgaacccgtaaatccacgctggcatcccgacgg
aacaattcccaaccccacactacgcacaaaagagcccgcccaacgctcaatcttgccgca
tccgtcgatgaacacattgattctgacgaagaggagcacttcgaagatcgcttggaaggt
cgggagccgtccttagaagacgaacaatccgaagaagaggaaaatgttgaagccaaacga
gttcggatggcacgggaatatctcgaacgcatggatcaacagtccgacagtgacgacact
tccgatgatgatgataacgacaacgatagcgaccaggacgatgtacaggatgatcgcgtg
gcccgaaaactgcaacgcgtgcgactcaagcgcgaagtagcggcaattacgaccccgcgg
cagcaagcccaggcatggattgcggcgggccatcaaagactactgcggggacacgatctg
acccccacttgcgtcgcccttcaatcggacggtgccaccgccatttcgggatccaaggat
cattccgtcattctttgggatatcgaaaccgcttcacggaaaacgcatttatgccccgtg
tggaagaaagaaaccgccgacagcagtaaaccacgtaccgttggggaagttttgtccgtc
gcctgctcggacgatggtcgctacgccgccgttggatcccgggacgctactgtccgtgtt
tttgacattcgttgtcgctcacaggcacttgtccaaacctttaccgggcataaaggcgcc
gtcacgtccctggcctttcggactaattcactgcagctcttctccggaagcgacgatcgc
tgtatacgacactacaatctctcggaaatgctctacatcgaaacactctacgggcaccag
tttggggtcaccgacttggattgtcatcgggatgaacgtcccgtatcggtgggtaaggac
cggaccgcacgggcttggaaactggcggaagacacacatttgatctttcggggcggcagt
aagctaccctccgcttccagcgttacggtcgtgaaggacgattggttcgtgactggacac
gaagacggacacctggctatgtggaaaacagacaagaaaaaggcggtggcacaaattgcc
aacgcacacggcgacgacacggaaattgtagcggtccaagctttgccgggcagtgatctg
gtagcgtcgggatcgtacgacggatacgttcgtttctggaaggcatcaaccggacggact
ttggcggaacggggtctgcaggctgtgggcgagattccgttgttcgggtacgtgaacgat
attgcctttggtcccaaggcccgcttttgtgtggctgcggtgggacaggaacaccgtctc
ggtcgttggaatcgagtggcccaggccaagaaccgcttggctatc
DBGET
integrated database retrieval system