Phaeodactylum tricornutum: PHATRDRAFT_18008
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Entry
PHATRDRAFT_18008 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pti01002
]
PHATRDRAFT_18008
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_18008
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_18008
Enzymes [BR:
pti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
PHATRDRAFT_18008
Peptidases and inhibitors [BR:
pti01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
PHATRDRAFT_18008
Ubiquitin system [BR:
pti04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
PHATRDRAFT_18008
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHATRDRAFT_18008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
UBA
zf-UBP_var
UCH_1
zf-UBP
EF-Ts_N
UBA_At5g58720
ESPR
Motif
Other DBs
NCBI-GeneID:
7197061
NCBI-ProteinID:
XP_002177539
JGI:
18008
UniProt:
B7FRR1
LinkDB
All DBs
Position
2:16832..19642
Genome browser
AA seq
844 aa
AA seq
DB search
METITELATLANVASPSDVVWNEECAYTFHSPYTTDQGIVVDLNTFVGTCQEMALTTSSR
GIFVRIVKRRQRKENKAGALETVSVEAPTKLALGVEGGFTTEEDQFETVCTTSVVVLEKV
GSLVQIAAEIPYTEESKGTFPTMVAISVDSILNHAGNMLRQDVKTWQLDQDDIQVSKYAE
NLPFVDNGVEISPDPKSWKCESSGATENLWLNLSDGYIGGGRKNWDGSGGSNGALDHFKE
SATQYPLVVKLGTITADLETADCYSYAPDEDGPVRIPNLAGLLEKRGIKVSAMQKTVKST
AELEVELNANYAFDAITEAGANLTPVSGPGLQGLQNLGNSCYLNSVMQVLMAVPELSKRY
GTSPGGSLTQHNLLQNVPPKEAAGNLLTQTTKLASALTSGLFAHPIAEEIGPDANAMVTD
PKYRLAPRMLKNVVGKNHVDFCTGQQQDAAQFLQYYLELLELQERKASARLTKGDGPLYT
TSHLFGFRTTSRLECQADQAVKYKDSATETIWSLRIPMEKAVPKPVPRLSIEACLDSWAS
ETTIDGLQWSHLGNAKHSATQKTRLTNFPRYIVLQAQRYTLGPDWSPIKLEVSLDVPDEM
DLSKYKFLGPLPSDRVVPAESADTEAKTADGPTTPAVDEAALAQLMDMGFSLNSCKRALT
AVGGNNIEAAMGWVFEHNTDSDFNDPLPDVGTDVSPEIGKAVAESAVQSLADSLGCFSVD
QVRVALEETNGAPDRAADWLFSHMDDLEGAISALKKNRAPVEPVGSEESVSLEDGPGFYR
LTGLISHIGKNTGSGHYVAHLKKGDKWIIFNDEKVAVSEHPPKEHAYLYLLQRTDTIDSP
HESY
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccataaccgaactcgcaacgttagccaacgtcgcttcgccaagcgatgttgtg
tggaacgaggaatgcgcctacacgttccactcgccgtacacgaccgatcaaggtatcgtg
gtagatctgaataccttcgttgggacgtgtcaagaaatggcgctgaccaccagctctcga
ggaattttcgtgcgcattgtcaaaagaaggcaacgcaaagaaaataaagccggagcattg
gaaactgtctccgtagaagcaccaacaaaactagctttgggcgtggagggaggctttacg
accgaagaagatcagttcgagaccgtttgtacaacttccgttgtcgttctggaaaaagtt
ggcagcctggtacagattgcagccgaaatcccctacacggaagaatccaaggggactttc
cccactatggtggccatcagtgtagattccatcctcaatcacgccggcaatatgttgcga
caggatgtcaaaacctggcaattggatcaagatgatattcaggtgtcgaagtacgccgaa
aacctcccttttgttgacaacggggtcgaaataagcccagatccaaaatcgtggaaatgt
gagtcttcgggggcgaccgaaaatttgtggctcaacctttccgacggctatattggcgga
gggcgcaaaaactgggacggatcgggtggatccaacggtgccttggatcattttaaggaa
tctgctacgcagtatccactcgttgtcaagctaggaacgatcacggccgatttggaaacc
gcggattgttactcttatgctcccgacgaagacggacccgtcaggattccgaatctagcc
ggcctgctagaaaagcgtggaatcaaagtttctgccatgcaaaagacggtgaaatcgaca
gcagagttagaggtagagctaaacgccaattacgcctttgacgcgatcaccgaggcagga
gcgaacttgacaccggtgtcggggccgggtttgcaaggtttgcaaaatttgggaaactca
tgctatcttaattcggtgatgcaggtcttaatggccgttcccgagcttagcaagcgctac
ggcacatctccaggtgggagcctcacgcagcacaacttattgcaaaatgtccctcccaag
gaagcagcaggtaatttgcttactcagacaaccaagctggccagcgcattgacttcgggt
ctctttgcccatcccatagccgaggaaatagggccagatgcgaatgctatggtcacagac
ccaaagtaccgattggctccacgaatgctaaagaacgttgttgggaagaatcacgtcgac
ttttgtaccgggcagcagcaagatgcggctcaatttcttcaatactacctggaactcttg
gagcttcaggaaaggaaagcttcggcgcgtttgaccaagggagacggtcctttgtatacg
acgtctcacttattcgggtttcgcacgacgtcacgtctggaatgtcaagctgatcaggca
gtaaaatataaggatagtgcaaccgaaactatttggagcctgaggattcccatggagaaa
gcagttccgaaaccggttcctcgcctgtcgattgaagcttgcttggactcttgggcatcg
gaaactactattgacggtttacaatggtcccatttgggaaatgcaaagcattccgctacc
cagaaaacacgcttgacgaactttccgcgatacatcgtgttgcaggcgcaacgatacaca
ctcggaccagattggagtccgatcaaattggaagttagtctcgacgttccggacgagatg
gatctgtccaagtacaaattccttggccctttaccaagcgaccgtgtggtaccggcagag
tccgcagacaccgaagcgaagacagcggatggtcctactaccccggccgttgacgaagct
gccttagcacaattgatggacatgggattctcactgaacagttgtaagcgtgcgctgacc
gctgtcggtgggaacaatatagaagcagccatgggttgggtgtttgagcacaacacggac
tcagattttaacgacccgttgccagacgttggaactgatgtatctccagaaattggtaaa
gctgtggctgaaagtgctgtccagtcactggcggatagtttaggctgtttttctgttgat
caagtccgagtagctttggaagagactaacggggcgcctgatcgagctgcggactggttg
ttttcccacatggacgacttggaaggtgctatttccgccttgaagaaaaacagggcaccc
gttgagcctgtggggtctgaggaaagtgtttcgctagaagacggaccaggtttttacagg
ttgacgggattgatttcgcatatcggaaagaacactggcagtggtcactatgtggctcac
ttgaagaaaggagacaagtggattatctttaacgacgaaaaggttgctgtctctgagcat
ccaccgaaggagcatgcatacttgtatctactgcagcgtacggataccatcgacagtccg
cacgagagctattag
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