KEGG   Phaeodactylum tricornutum: PHATRDRAFT_18217
Entry
PHATRDRAFT_18217  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K13124  mitogen-activated protein kinase organizer 1
Organism
pti  Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:pti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pti03041]
    PHATRDRAFT_18217
Spliceosome [BR:pti03041]
 Complex C
  Other components
   Complex C specific factors
    PHATRDRAFT_18217
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_Gbeta EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_ACSF4 WD40_RFWD3 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_HPS5 NBCH_WD40 Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_EIPR1 WD40_like Beta-prop_DCAF4 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_2nd Beta-prop_Aladin
Other DBs
NCBI-GeneID: 7197066
NCBI-ProteinID: XP_002178014
JGI: 18217
UniProt: B7FSN8
LinkDB
Position
2:complement(830843..832515)
AA seq 326 aa
MIASNRDVGLALPKTAVARLIGHDGPVQTLRFTGDGKYCLTGGHDRSIRLWNPTPLPRAL
PIQAYTDGYTHPISSLALDQKSSTLVAASGNTLIVTDVVTKRVKRRYQGHAGRINAVAIS
DNCETFLSASYDATVCVWDGRASRSHTPIQIFKEAKDSVSCMHLDQTDGNAVIMAGSVDG
AVRSYDLRKGQIRCDQVGGAITCMAPTYDDKCLAVSCLDGTIRLIELDTGELLNTYSSHH
KAGMYGLECCLTADDATIVSGSENGDAVLYDLVRATPIQILRGHRKPTCTIAAHPSVAQN
SVILTGSYDGNAVVWAHESSFMRWEE
NT seq 981 nt   +upstreamnt  +downstreamnt
atgatagcatccaatagagacgtgggattggcattgcctaagacagccgttgctcgattg
atcggacacgatggacctgttcagacgctgcgttttaccggcgacggaaagtactgtttg
acaggtggacacgatcgttccattcgactatggaatccgactcctcttccacgggctctg
ccaattcaggcttacacggacggatatacccaccccatatcgtctcttgcgttggaccag
aagtccagcactttagtggcagcttctggaaataccctaatagttaccgatgtcgtaacc
aaacgtgtgaaacggcgataccaaggccacgctgggcgtattaacgcggttgctatcagc
gataactgtgagactttcttgtcggcctcttatgatgcaactgtttgtgtttgggatgga
cgtgccagtcgcagtcatactcccattcaaatttttaaggaagccaaagattctgtgtca
tgcatgcatctagaccagacagatggaaatgccgtcatcatggcgggttcagtcgacggc
gcagtgagatcctacgacttgagaaaaggacaaatccggtgcgatcaagttgggggtgcg
atcacttgtatggcacctacttacgacgacaaatgtctcgcagtgagctgccttgatgga
actatccgtttgattgagctggatacgggtgagttgctcaacacctattcttctcaccac
aaggcaggcatgtatggactggaatgctgcttgactgctgatgacgcaaccattgtctcg
gggtcagagaatggagatgctgttttgtatgatttagttcgtgcgacgcccatacagatt
cttcgggggcatcgcaagcccacctgtacgatcgctgcgcatccttctgttgcccaaaat
tccgtcatacttacgggaagctacgatggaaacgctgtagtatgggcgcacgaatcttca
ttcatgagatgggaagagtga

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