Phaeodactylum tricornutum: PHATRDRAFT_19552
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Entry
PHATRDRAFT_19552 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K14565
nucleolar protein 58
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PHATRDRAFT_19552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATRDRAFT_19552
Ribosome biogenesis [BR:
pti03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
PHATRDRAFT_19552
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
NOP5NT
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
7199916
NCBI-ProteinID:
XP_002179343
JGI:
19552
UniProt:
B7FW92
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Position
6:complement(19871..21720)
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AA seq
529 aa
AA seq
DB search
MLVLFETPAGYSLFKVTDEKKLKKTDADDIHDTFFSDFGKASKFLEMVSFKPFADTADAV
SAASAMVEGKVSKSLTSFLKKKLKKSNDLSVAVADKAIAAPLKESVRDDLKIVHDSKSQE
IFRGIRAHMDELLTNDDSNVTKEDLRAMQLGLSHSLSRYKLKFSADKVDTMVIQAVGLLD
ELDKEINTYAMRVKEWYGWHFPELQGLVGDNAKYSKLVLKAGMRPTFKNYDLSDILEEED
VEAAVKEAAEISMGTEIADFDILNIQSLADQVLSMTEYRSQLYEYLKNRMNAIAPNLTIL
VGELVGARLISHAGSLMNLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ
AAPKNKGKISRVLAAKASLAIRVDALSDETADQLDTTIGFEGRAKVEARLRQLEGGVFVT
NGNVSASKTARYDPVAAKTAAAAPAYNDSSDMVLDVGTNGSKTDENATKKKKKDKKKSDN
GDEESPKKKSKKDKKRKAEAVDDEEQDDDEAKKSAKKAKKDKKKRKSQE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttttgttcgaaacgccggcgggttattcgttgttcaaggtcacggatgagaaa
aagttgaaaaagacggacgccgatgatattcatgacacgtttttttccgattttggcaag
gctagcaaattcttggaaatggtgtcgttcaagccttttgccgacactgccgatgccgta
tcagccgcctccgctatggttgaaggcaaggtgagtaagtcgctcaccagttttctaaaa
aagaaactaaaaaagtccaacgacttgagcgtagccgtcgccgacaaggcaatcgcggcc
ccactcaaagagtcagttcgtgatgacctcaaaattgtgcacgacagcaaatcgcaggaa
atatttcgtggcatccgtgcgcacatggatgaattgcttaccaacgacgattcaaacgta
accaaagaagatttgcgcgcgatgcagcttggtctctctcattcactgtcgcggtacaag
ctcaaattttccgccgacaaggtggataccatggtcatccaagccgtgggcttgctggac
gaacttgacaaagaaattaacacatatgccatgcgtgtcaaggaatggtatggttggcac
tttcctgagttgcaagggctcgttggcgacaatgccaagtactcaaaactagttcttaag
gccggtatgcgacctactttcaaaaactacgatttgagtgatattctggaagaagaagac
gttgaagctgcagtaaaggaggctgctgaaattagcatgggcaccgaaattgctgacttt
gatattctcaacattcagtctctggctgatcaagtactgagcatgacggagtatcggtcg
caactatatgagtatctcaagaatcgtatgaacgctattgcacccaatttgaccattctt
gtcggtgaattggttggtgcccgcttgatttcgcatgctggatcgttgatgaatcttgct
aaacaaccggccagcacagtacaaatccttggtgccgaaaaggcactctttcgcgcttta
aaaacgaaacacgatactccgaaatacggcttgatctatcatgcctcactgataggacag
gcagcaccaaagaacaagggaaaaatctcgcgcgtactggctgctaaggcgtctttggcc
attcgggttgatgcgctgtcagatgaaaccgctgatcagcttgacacgacgattggtttc
gaaggccgcgccaaagtagaagcccggcttcgacaattggaagggggagtcttcgtgacc
aacggtaatgtatcagcatccaagacagccaggtacgatcctgtggcggccaagacggcc
gctgctgctcctgcctacaacgattctagtgacatggtattggacgtggggacaaatgga
agtaagacggacgagaatgcgacaaagaaaaaaaagaaagataagaaaaaatcagacaat
ggagatgaagaatcaccgaagaaaaagtcaaaaaaggacaagaagcggaaggctgaagct
gtcgacgacgaagaacaggatgatgacgaagcgaaaaagtcagcgaaaaaggccaagaaa
gacaagaaaaagaggaagtcacaagaatga
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