KEGG   Phaeodactylum tricornutum: PHATRDRAFT_19604
Entry
PHATRDRAFT_19604  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K08735  DNA mismatch repair protein MSH2
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PHATRDRAFT_19604
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pti03400]
    PHATRDRAFT_19604
DNA repair and recombination proteins [BR:pti03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     PHATRDRAFT_19604
SSDB
Motif
Pfam: MutS_V MutS_IV MutS_III AAA_27 AAA_29 AAA_22
Other DBs
NCBI-GeneID: 7200309
NCBI-ProteinID: XP_002179388
JGI: 19604
UniProt: B7FWI1
LinkDB
Position
6:complement(227981..229307)
AA seq 363 aa
MNDLWASTTGNAQATVKLETADDGFLFRLTNTNDTKLLQNQLGNVVQIHKLLKNGVSFST
KELRQLATAQQDLMAEYDRQQKVVVQDALKVAATYSVVLQRAFDAVATLDVLVGLAHQAA
YSPHGYCRPTLIDGDDCAGHGIQLQGARHPCVEVQESVSDYIPNDVDLTHDRSNVLLVTG
PNMGGKSTYIRAVGAIVLLAQIGAFVPCQSATIHIRHHILARVGAGDWQDQGISTFLAEM
LESAAILRTATARSLIIVDELGRGTSTFDGYGLARAIAEYMVRNVGNLCVFATHFHELTS
LADVFTNVRNCHVTAQRDVQGLTFLYQIQPGPCLESFGIQVAELAGVPAVVVQDAQRKAR
ELE
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaacgacttgtgggcctccaccaccggcaacgcccaagccacggtcaagctagaaaca
gccgacgacggtttcctctttcgactcaccaacaccaacgacaccaaactcttgcagaat
caactcgggaacgtggtgcaaatccacaaactgctcaaaaacggcgtctccttctccacc
aaggaactccgccagctcgccaccgcccagcaggatttaatggccgaatacgatcgccag
caaaaagtcgtcgtccaagacgccctcaaagttgccgctacctacagcgtcgtactccaa
cgcgcctttgacgccgttgccaccctcgatgtcctagtcggactcgcccaccaagccgcc
tacagtccccacggatactgccgacccactttgatcgacggcgacgactgcgccggtcac
ggcattcagcttcaaggcgcacgccatccctgcgtagaagtacaggaatccgtctccgac
tatattcccaacgacgtcgatctcacccacgaccgttccaacgtactcctcgtcacgggc
cccaatatgggtggtaagagcacgtacattcgcgccgtcggtgcgattgtcctgctcgcg
caaattggggcctttgtgccctgccaatcggccaccattcacattcggcaccacattctc
gcccgcgttggggccggagactggcaagatcagggcatttccacctttttggcggaaatg
ctcgaatcggccgccattttgcggaccgccacggcccgatcgctcatcatcgtcgacgaa
ctggggcgcggcacgagtacgtttgacggatacggcctggcccgggccattgccgaatat
atggtccggaacgttggtaatctttgtgtctttgccactcacttccacgaattgaccagt
ctggccgacgtctttacgaacgttcggaactgtcacgtcacggcgcagcgggacgtgcag
gggttgacctttctgtatcagatccaacccggtccgtgtctagagtccttcggcattcaa
gtcgccgagctggccggcgtacccgccgtcgtcgtgcaggatgcccaacgcaaggcgcga
gaactggaa

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