Phaeodactylum tricornutum: PHATRDRAFT_19761
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Entry
PHATRDRAFT_19761 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PHATRDRAFT_19761
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pti01007
]
PHATRDRAFT_19761
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_19761
03029 Mitochondrial biogenesis [BR:
pti03029
]
PHATRDRAFT_19761
Enzymes [BR:
pti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
PHATRDRAFT_19761
Amino acid related enzymes [BR:
pti01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PHATRDRAFT_19761
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PHATRDRAFT_19761
Mitochondrial biogenesis [BR:
pti03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PHATRDRAFT_19761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
ATG16
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
7199943
NCBI-ProteinID:
XP_002179281
JGI:
19761
UniProt:
B7FX58
LinkDB
All DBs
Position
6:748175..750501
Genome browser
AA seq
702 aa
AA seq
DB search
MTVQTNEQLQDELDALNAQITKQGSAVRELKKAGDADAVAEAVAKLQALKINAAEMGKSL
VSDEPEFNRKAFDELVLRKMFVVPSFEIHGGVKGLFDLGPPACSLKAAMIDLWRKHFVLA
ESMLEMECTCLTPEAVLKTSGHVDRFTDLMVKDPQTAECFRADKLLEDAIDSLLEANPTM
PVEEREDHLRIQRQADAFSPTELDELLIKYDCKGPSGEAYTPSFPFNLMFKTSIGPEGTS
VGYLRPETAQGLFVNYRRLLDLNAGKMPFAAAQIGLGFRNEIAPRSGLLRVREFCMGEIE
HFVNPKDKSHPNFKSVTDKELVLFGRDDQLGSGKTKTIACGEAVESGLINNETLAYFMAR
TQLYMEKIGMDPQRLRFRQHLATEMAHYAADCWDLEIKSSYGWQECVGHADRACYDLEVH
SRATKTSMVATQKVDPPQEMEVAKLKFDRKLLGQAFKGDQRVVSGMLESLAESWTDFEPI
ATKLENDGKTTVEGFEITKEMMTWTKQKKTVHEIKFTPSVIEPSFGMGRILYSLLEHSFY
QRESDEQRVVMRFTPQVAPEKCAVLPISSNPECNEIVDDIARDLMDSDLATRVDKSTAAI
GRRYSRSDELGIPFAVTVDFDTLNDGTVTLRERDSTVQVRLPKNDINYLLFQIVHSRMTW
EDVMKKYPVVSTGDDTEVAAEDAVTVVEQTSRGAFRRPAQPK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgactgtccagacgaacgaacaacttcaagatgaactggacgctctaaacgctcagatt
accaaacagggtagcgcagtccgggagcttaagaaggccggtgacgcagacgccgtcgcg
gaggccgtggccaagcttcaagcactcaagatcaatgcagcggaaatgggcaagagcctc
gtctcggatgagcccgaattcaaccgaaaggcgttcgacgagcttgtattgcggaaaatg
tttgtggtaccctcgttcgagattcatgggggtgtgaagggtctctttgatttgggtcct
ccagcttgctctctcaaggctgccatgatcgatctgtggcgcaagcatttcgtacttgct
gaaagtatgctggagatggaatgcacctgtttgacccccgaggccgtcctcaagacaagt
ggtcacgtggaccgtttcacagatctcatggtaaaagatccgcagacagcggaatgcttt
agggctgacaagctcttggaagatgccatcgattcgttgctggaagccaacccgacaatg
ccggtggaagaacgggaagatcaccttcgtattcagcgacaggcggacgccttttcgcct
accgaattagacgaacttttgattaagtacgattgcaagggaccttccggtgaagcctat
acaccgtcttttcccttcaatctcatgttcaagaccagcattggcccggaaggtacttcg
gtaggttacttgcgtccagagacagcccaaggattgtttgtcaactaccgtcggcttttg
gacttgaatgctggaaaaatgcctttcgccgctgcccaaattggtttaggatttcgcaac
gagattgccccacgttcaggccttttgcgtgtgcgcgaattttgtatgggagagattgaa
catttcgtcaatcctaaagacaaatcgcacccaaattttaaatctgtcaccgataaagag
ctggttctttttggtagagatgatcaactgggcagcggaaagaccaaaacaattgcctgc
ggtgaagccgttgagagtggcttgatcaacaacgaaactttggcttatttcatggcgcgc
acacagctctacatggaaaagatcggcatggatccccagcgtttgcgtttccgccagcat
ttggctaccgaaatggctcattatgccgccgattgctgggatctggaaatcaaatcaagt
tatggctggcaagaatgcgttggacacgctgatcgcgcttgctacgatctcgaggtgcac
agcagggcaaccaagacctctatggtggccactcagaaagttgatccaccacaagaaatg
gaagttgccaaactcaagtttgatcgaaagttgctcggtcaagccttcaaaggtgatcaa
cgcgtggtgtccggtatgctcgagtcgttggccgaaagttggacggactttgagcctatt
gcgacgaaattggaaaacgatggaaagacgacggtggagggttttgagatcactaaagaa
atgatgacttggacgaagcagaaaaagacagttcacgaaattaagtttactccctccgta
atcgaaccttcgtttgggatggggcgtatcttgtattcgctattggagcattccttctac
cagcgcgaatcggacgagcagcgcgtagttatgaggtttactccgcaggtggcccctgaa
aaatgtgcagtattgccgatcagcagcaatcctgagtgcaacgaaatcgttgatgacatt
gctcgtgacttaatggacagcgacttggctactagagttgacaagtctacggcagcgatt
ggtcgtcgctactctcgttctgacgagctcggtatcccttttgccgtgacggtggatttc
gatactctcaacgacggaaccgtgacgctccgtgaacgcgattccacagttcaggttcgc
ctccccaaaaatgacattaactaccttctttttcaaatagttcacagccgcatgacttgg
gaggacgtcatgaagaagtatcctgttgtttcaactggtgatgatactgaggtagccgcg
gaagacgctgtaactgtagttgagcagacgtctcgtggcgcattccggcggccggcccag
cctaagtag
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