Phaeodactylum tricornutum: PHATRDRAFT_21394
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Entry
PHATRDRAFT_21394 CDS
T01075
Symbol
CSN4
Name
(RefSeq) COP9 SigNalosome subunit 4
KO
K12178
COP9 signalosome complex subunit 4
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_21394 (CSN4)
Ubiquitin system [BR:
pti04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
PHATRDRAFT_21394 (CSN4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PCI
PSMD12-CSN4_N
CSN4_RPN5_eIF3a
Motif
Other DBs
NCBI-GeneID:
7202044
NCBI-ProteinID:
XP_002181404
JGI:
21394
UniProt:
B7G2M1
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Position
12:complement(587062..588359)
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AA seq
405 aa
AA seq
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MEALVRTIDTAIVNCDFVTLASVFSDRGTTDSWHAVGQGEQRSVAAHFVQAVVANEAFLV
QALSNSTNSISVEDFMIAALNHLPATVDRAADNTLRQRLFDAKINRDDVDYVGAAQILAG
MRMDDDPQSIYYLTASARTDVYVKIAECFLAEDHVVEADAAVTKAGTVAEAIPDKAAHTA
LLLRYKSTYVRVLDANRKFLAAAQRYHELSQSGGDLIDADDLLQLLGRAVTCAILAPNGP
QRQRVLAHIVEDPRLPQLDQIDAFATHRTILQKMCRHQILPRAQLETFEASLAEHQKAIM
GDGLTIMERGVVEHNMMAVSKLYRTIYMDKLAHILDLPVPKAEALAAKMITDGSLKACLD
QVEGLLEFQTPEPPTQRWDRNITSLCVELNQVAEEITGFRSRQGL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaagccttggtgcgtaccatcgatacggcgatagtcaattgcgactttgtgacgcta
gcgagcgtcttttccgatcgtggcaccaccgattcctggcacgccgtcgggcagggcgaa
caacgttcggtggcggcccattttgtccaagcagtcgtcgcgaacgaagcctttctcgtc
caagccctctccaatagtactaacagtataagtgtagaagacttcatgattgcagccttg
aatcatttacccgcgacggtcgaccgagccgccgacaatacactaaggcagcggctcttt
gacgccaagatcaatcgagacgacgtcgactacgtcggcgccgcccaaattctggcgggc
atgcggatggacgacgatccgcagtcgatctactacctcacagcctcggcacggacggat
gtgtacgtcaagattgccgagtgtttcctcgccgaagaccacgtggtggaggcggacgct
gccgtcaccaaggccggcacggtggccgaggccatcccggacaaggcggcacacacagca
cttctcctgcgctacaaaagtacgtacgtccgagtactagacgccaaccgaaaattccta
gctgctgcccaacggtatcacgaattgagtcaatccgggggggatttgatcgacgccgac
gacttactccagctcctcggccgggccgttacctgcgccattctcgctcccaacggtccg
caacgacagcgcgtgctcgcgcatattgtggaagacccccgtttaccgcaactggatcaa
atagatgcctttgccacgcaccggacgattctgcaaaaaatgtgccgccaccagattctc
ccccgcgcccaactcgaaacctttgaagcatccttggcggaacaccaaaaggccatcatg
ggggacggtctcaccattatggagcggggtgttgtcgagcacaacatgatggccgtttcg
aaactttaccgcactatttacatggacaagctcgcgcacattttggatttaccggtaccc
aaagccgaagccttggccgccaaaatgatcacggacggatccttgaaagcctgcttggac
caagtagaaggattactggagtttcaaacacccgaaccaccgacccaacgctgggatcga
aatattaccagcctgtgcgttgaactcaatcaagtggcggaggaaatcacaggttttcga
tcccgacaaggattgtag
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