KEGG   Phaeodactylum tricornutum: PHATRDRAFT_21929
Entry
PHATRDRAFT_21929  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K05236  coatomer subunit alpha
Organism
pti  Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:pti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pti04131]
    PHATRDRAFT_21929
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pti04147]
    PHATRDRAFT_21929
Membrane trafficking [BR:pti04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    PHATRDRAFT_21929
Exosome [BR:pti04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   PHATRDRAFT_21929
  Exosomal proteins of bladder cancer cells
   PHATRDRAFT_21929
SSDB
Motif
Pfam: COPI_C Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 B-prop_COPA_B_2nd WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR75_1st Beta-prop_EML TPR_COPA_B ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 7203051
NCBI-ProteinID: XP_002182326
JGI: 21929
UniProt: B7G4Z7
LinkDB
Position
15:complement(111359..>115412)
AA seq 1270 aa
MLTKFESKSARVKGLAFHPVRPWVCASLHNGVIQLWDYRVGTVIDRFEEHEGPVRGVDFH
VSEPLLVSGGDDYKIKVWDYKLRRCLFTLLGHLDYIRTVQFHSTFPWILSASDDQTLRLW
DVDRRTCLSVLTGHNHYVMCASFHPTEDLIVSASLDQTVRVWDTTGLRKKQTGEASGGGH
MDGSMRPPSTGLNVQAELFGTNDVVVKYVLEGHDRGVNWASFHPTLPLLASAADDRQVKL
WRMSETKAWEVDTLRGHANNVSCCLFHPKHDLVVSNSEDRSIRVWDVSKRVGVQTFRREG
DRFWILAAHPTQNLLAAGHDSGMIVFKLERERPASCYGPTSQLYYVRGRELLLHDYGRGS
TGVDVPITSLRRMGTQAQTDGIGSAPRYLTYNHHNPSEGNILVTSDVDGGSYELVTFSLS
NASGSVTDGKRGSCLGPGVFLGRNRFAILDRQRQIVIKNLQNETTKRVQPPVPNVDGLLD
GGASGRVLLRAEDRAILFEVQSRRVLGEITAPKIKSVVWSPDGSKVAIVCKYGVVMADRS
LEQLCSISDNVRIKSGAWDVSPTGGTASELFVYTTLHHVKYCLPSGDTGTIRTLDQPLYA
QRIVKDQLFCLDREARPRILSLDTTEALFKLALSQQKYGKVMHMVRHSRLCGRAIVAYLQ
NKGFPEVALHFVREPRTRFRLALACGNIEAAMESAFTLEQKAQAEGKDTGRDVWGELGSE
ALRQGNHQVVEMSYQRTKDFDRLSFLYLITGDTDKLRKMLKISNMRQDIMGRYHNALLLG
DAAERVHVLEESGNLPLAYISATLHGLMEDADRIKITIETNGGSAGDRKTHCLLQPPTPI
LRANNWPTLEVQKTTLEDLSAADGEAHEEDGGEYHDAAAAAATELGTEDWQDDDEDMGMG
TGAAAAAANDLDFGADDDLGDWGDDLDELGDLGEPSHREADEMIDVSEVGEVGDFVMPTS
GRPPAGCWVGNSSHAADHLAAGAASSALQLLNRQIAASEFALLKSNMIACYLGSMTSAPG
VSGSPSMSIPLLRNDVNGHPGAESLPRTPLTLKQTVAGIRNGYRFFQGGKFNEAKAAFVS
VLAEIPLVVTGNRAEGNEIKEMLSICREYITAIRIKAEMAAAATDPVRSTELSAYFTHCN
LQPVHLLLALRAAMGTAFKNKNFIVAASFARRLLELPDMSNERNAELRVKATKVLQKSEQ
MARNEHQLNYDETKTFAIDCKDFVPIYSGDSSTQCSYCGSSYADESMSHSLCLTCGFCAV
GIQTIGLVTG
NT seq 3813 nt   +upstreamnt  +downstreamnt
atgctaaccaagtttgagtccaaatcggcgcgggtgaaaggtttagcctttcatccggtg
cgtccctgggtatgtgcatctttgcacaatggtgtaattcaactttgggattatcgagta
ggcaccgtcattgatcgatttgaagagcacgaaggtccggtccgtggtgtcgatttccac
gtctcggagccgttgctcgtatccggcggtgacgactacaaaatcaaggtctgggattac
aagctccgtcgttgcttgtttaccctactgggacatttagactacattcggacggttcaa
tttcacagtacgtttccctggatattgagcgcgtccgacgatcaaacgctgcgtttgtgg
gatgttgatcgtcgcacctgtttgagtgtcttgaccggacacaatcactacgttatgtgc
gcgagcttccatcccaccgaagatctcatcgtgtcagcgtcgttggatcagacggtccgg
gtgtgggataccaccggtctccgtaagaaacaaacgggtgaggccagtggtgggggacac
atggatggatccatgcgtccgccgtccaccggacttaacgtgcaagccgagctgttcgga
accaacgatgttgtcgtcaagtatgtactcgaaggtcatgaccgaggcgttaactgggcg
tccttccaccctactttgccactcctcgcctcggcagcggatgatcgacaggtcaagttg
tggcgtatgagcgaaaccaaggcctgggaagtcgataccctccggggacacgccaacaat
gtgtcctgctgcttgtttcatcccaaacacgatcttgtcgtctccaattcggaagatcgc
tcgatccgtgtttgggatgtcagcaaacgtgtcggcgtccaaacctttcgccgtgaaggc
gatcgcttttggattctcgccgcgcacccgacgcagaatttgctcgcggccggacacgat
tccggtatgatcgtcttcaaattggaacgggaacgtcccgcttcgtgctacggaccgact
tcccagctctactacgtacgcggtcgggaacttctcctgcacgactacggacgcggtagc
accggagtcgacgttcccattaccagtctccgccgtatgggaacgcaggctcaaacggac
ggtataggctcagccccgcgataccttacctacaatcatcacaacccgtccgaagggaat
attttggtcacttcggatgtcgacgggggttcctacgaactcgttaccttcagtttgagc
aatgcgagtggttccgtcacggacggaaaacgtggttcctgccttgggccaggtgttttt
ttgggacgcaatcgcttcgccattcttgatcgccagcgacaaattgtaatcaagaatcta
caaaatgagacgaccaaacgtgttcaaccacctgttcccaacgtggacggactgttggac
ggtggcgcttcgggtcgcgtattgttgcgcgccgaagaccgtgccattctgtttgaagtc
caatcccgacgcgtgctgggagaaatcacggctcccaagatcaaatcggttgtctggagc
ccggatggaagcaaagtggccattgtctgcaagtacggtgtcgttatggcggatcgcagc
ctcgagcagttgtgctcaatttcggacaacgtccgcatcaagtcgggtgcgtgggacgtc
agtcccacgggcggcacggcctcggaactatttgtctacaccaccctccatcacgtcaag
tactgcttgccgtcgggagacactggtacgatccgtacgctagatcaaccgctctacgcg
cagcgtatcgtcaaggaccagcttttctgtctcgatcgcgaagcccgaccccgcattctg
agtctcgacacgaccgaagccctcttcaaactggcgctgtcgcagcaaaagtacggcaaa
gttatgcacatggtccgtcactctcgcttgtgcgggcgcgccattgttgcttatttgcaa
aacaagggtttcccggaagtcgcattgcactttgtgcgggaaccccggacccgttttcgc
ctcgccttggcgtgcggaaatattgaagccgccatggaatcagcctttacactggagcaa
aaagctcaagcggaaggcaaggataccggacgagacgtttggggcgaattaggcagtgaa
gcgttgcgtcaaggcaatcaccaagttgtcgaaatgagttatcaacgcacgaaagacttt
gaccgcttgtcgtttttgtacttgattaccggtgatacagacaagttacgcaaaatgctc
aaaatttcgaacatgcgtcaagacattatgggtcgctaccacaatgccttgttgttgggc
gatgcagccgagcgtgtgcacgtcttggaggagtcgggaaatttgccgctcgcctacatc
agtgcaaccttgcatggtttgatggaagacgcggaccggatcaagattactatcgaaaca
aatggtggcagtgctggggatagaaagacacactgtttgctgcaaccccccactcctatc
ctccgcgccaacaactggccaacactcgaggtacaaaagacgactcttgaagacctatcg
gcagccgacggtgaagctcacgaagaggacggtggtgaatatcacgatgcagcagctgcg
gcagcgactgagttgggtacggaagattggcaagacgacgacgaggatatgggtatgggt
accggcgccgcggcagcggctgctaatgacttggactttggtgccgacgacgatctcggc
gactggggcgacgatctggatgaactcggcgacctgggtgaaccgtcacatcgtgaggct
gacgaaatgatagacgtttcggaagtcggagaagttggtgactttgttatgcctacttct
ggacgccctcctgctggttgttgggtaggcaatagttcacacgcggccgatcatctggca
gccggagctgcgtcttcagcgttacaattattgaatcgtcaaattgcggcgagcgaattc
gctctactcaagtcaaatatgatcgcttgctatttgggttccatgacgagcgctcctggt
gtttcgggcagtccgagcatgtccattccgttgctacgaaatgatgttaacggacatccg
ggtgcggaaagtctgcctcgtacacccttgactttgaagcaaacggtagccgggattcgc
aatggatatcgcttcttccagggtggaaagttcaacgaggccaaggcagcttttgtatca
gtgttggccgaaattccgcttgtagttaccggcaaccgggcagaaggcaacgaaattaag
gaaatgctcagtatttgccgcgaatacattacagcaattcggatcaaagcggaaatggca
gcagctgcgactgacccggtccgctccactgagctgtcagcctactttactcactgcaac
ctgcaaccggtccacttgctgcttgctcttcgtgctgccatgggaacggccttcaagaac
aaaaactttatcgtggctgccagctttgcgcgtcgtttgttggagcttccagacatgagt
aacgaacgcaatgcagaattgcgagtcaaggcaactaaggtgttgcagaagagcgagcaa
atggcccgaaatgagcatcagctgaactatgacgaaacgaagacatttgcgattgactgc
aaagactttgtccctatttattcgggcgacagctcgacgcagtgttcatactgcggatct
tcctacgcggacgaatctatgtcgcacagtctgtgcttaacatgtggattttgtgctgtc
gggatccaaaccatcgggctcgtcactggataa

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