KEGG   Phaeodactylum tricornutum: PHATRDRAFT_22713
Entry
PHATRDRAFT_22713  CDS       T01075                                 
Symbol
Rab1a
Name
(RefSeq) hypothetical protein
  KO
K07874  Ras-related protein Rab-1A
Organism
pti  Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:pti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pti04131]
    PHATRDRAFT_22713 (Rab1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pti04147]
    PHATRDRAFT_22713 (Rab1a)
   04031 GTP-binding proteins [BR:pti04031]
    PHATRDRAFT_22713 (Rab1a)
Membrane trafficking [BR:pti04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    PHATRDRAFT_22713 (Rab1a)
 Autophagy
  Other autophagy associated proteins
    PHATRDRAFT_22713 (Rab1a)
Exosome [BR:pti04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PHATRDRAFT_22713 (Rab1a)
  Exosomal proteins of other body fluids (saliva and urine)
   PHATRDRAFT_22713 (Rab1a)
  Exosomal proteins of colorectal cancer cells
   PHATRDRAFT_22713 (Rab1a)
GTP-binding proteins [BR:pti04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    PHATRDRAFT_22713 (Rab1a)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase GTP_EFTU SRPRB Gtr1_RagA AAA_7 FeoB_N ABC_tran AAA_16 LANC_like AAA_5 DUF3533 Septin AAA_22 AAA_29 CRAL_TRIO_2
Other DBs
NCBI-GeneID: 7195044
NCBI-ProteinID: XP_002183313
JGI: 22713
UniProt: B7G8A9
LinkDB
Position
19:194487..195933
AA seq 203 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEQDQKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLHEIDRYAAENVNKLLVG
NKSDLTAKRVVSTEQGKEFADSLGIEFLETSAKTSSNVEQAFLTMASQIKARMKTQPSAA
GAQAGKGGVSLRSQQVKNKEGCC
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaatcccgaatacgattacctttttaaactgctccttattggagactccggtgtcgga
aagtcctgtttgttgcttcgatttgccgacgacacgtacacggaatcgtacatttcgacc
attggagtcgattttaaaatccgcaccattgagcaggaccaaaagacgatcaagttgcag
atttgggatacggctggacaagaacgcttccggaccatcacctccagttactaccgcgga
gctcacggcattattgtcgtttacgacgtgacggacgccgaatccttcaacaatgtcaag
cagtggttacacgaaattgaccgatacgccgcggagaacgtcaacaaattgttggtcggt
aacaagtccgacttgaccgccaagcgtgtcgtatccaccgagcagggcaaggaattcgcc
gattcgttgggcattgaatttttggagacttccgccaagacctcttcgaatgttgaacag
gcatttttgaccatggcttctcagatcaaggcccgaatgaagacgcagccttcggccgcc
ggtgcacaagctggcaaaggaggagtctcgctgcgctcgcaacaggtcaagaacaaggaa
ggatgctgctaa

DBGET integrated database retrieval system