Phaeodactylum tricornutum: PHATRDRAFT_22713
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Entry
PHATRDRAFT_22713 CDS
T01075
Symbol
Rab1a
Name
(RefSeq) hypothetical protein
KO
K07874
Ras-related protein Rab-1A
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATRDRAFT_22713 (Rab1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATRDRAFT_22713 (Rab1a)
04031 GTP-binding proteins [BR:
pti04031
]
PHATRDRAFT_22713 (Rab1a)
Membrane trafficking [BR:
pti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
PHATRDRAFT_22713 (Rab1a)
Autophagy
Other autophagy associated proteins
PHATRDRAFT_22713 (Rab1a)
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHATRDRAFT_22713 (Rab1a)
Exosomal proteins of other body fluids (saliva and urine)
PHATRDRAFT_22713 (Rab1a)
Exosomal proteins of colorectal cancer cells
PHATRDRAFT_22713 (Rab1a)
GTP-binding proteins [BR:
pti04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
PHATRDRAFT_22713 (Rab1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
GTP_EFTU
SRPRB
Gtr1_RagA
AAA_7
FeoB_N
ABC_tran
AAA_16
LANC_like
AAA_5
DUF3533
Septin
AAA_22
AAA_29
CRAL_TRIO_2
Motif
Other DBs
NCBI-GeneID:
7195044
NCBI-ProteinID:
XP_002183313
JGI:
22713
UniProt:
B7G8A9
LinkDB
All DBs
Position
19:194487..195933
Genome browser
AA seq
203 aa
AA seq
DB search
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEQDQKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLHEIDRYAAENVNKLLVG
NKSDLTAKRVVSTEQGKEFADSLGIEFLETSAKTSSNVEQAFLTMASQIKARMKTQPSAA
GAQAGKGGVSLRSQQVKNKEGCC
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgaatacgattacctttttaaactgctccttattggagactccggtgtcgga
aagtcctgtttgttgcttcgatttgccgacgacacgtacacggaatcgtacatttcgacc
attggagtcgattttaaaatccgcaccattgagcaggaccaaaagacgatcaagttgcag
atttgggatacggctggacaagaacgcttccggaccatcacctccagttactaccgcgga
gctcacggcattattgtcgtttacgacgtgacggacgccgaatccttcaacaatgtcaag
cagtggttacacgaaattgaccgatacgccgcggagaacgtcaacaaattgttggtcggt
aacaagtccgacttgaccgccaagcgtgtcgtatccaccgagcagggcaaggaattcgcc
gattcgttgggcattgaatttttggagacttccgccaagacctcttcgaatgttgaacag
gcatttttgaccatggcttctcagatcaaggcccgaatgaagacgcagccttcggccgcc
ggtgcacaagctggcaaaggaggagtctcgctgcgctcgcaacaggtcaagaacaaggaa
ggatgctgctaa
DBGET
integrated database retrieval system