KEGG   Phaeodactylum tricornutum: PHATRDRAFT_22868
Entry
PHATRDRAFT_22868  CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K14855  ribosome assembly protein 4
Organism
pti  Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:pti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pti03009]
    PHATRDRAFT_22868
Ribosome biogenesis [BR:pti03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    PHATRDRAFT_22868
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR75_2nd eIF2A RMC1_N NLE Beta-prop_Nup120_160 Ge1_WD40 WD40_like Beta-prop_DCAF4 WD40_RFWD3 VPS8_N Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 7195357
NCBI-ProteinID: XP_002183669
JGI: 22868
UniProt: B7G8X7
LinkDB
Position
20:complement(79534..81204)
AA seq 551 aa
MTDRASTATVAAPNASASTAGGIAWAGSLVGVNNPNNLGYRYSTPSKRYRTTLDDGDDAS
RDVPTNIQVQFRNRQGEDLAQTLDLPTQSTIDDLTALVHSLLENSDSHDEQQRQKQGAGK
IPYSFYATILKNGVQDDVEITHTLSDLLQQHAISTEDVLQLTYQPLAVFRVRPVTRCTDT
LPGHTEAVLHVQYAPDGQMLASGGGDTTVRFWDVHTSTPKYTCKQHKNHVLCVAWAPNGK
RFVSADKNGVWIVWDPTKGEAVGKAVKAHRQWITSLAWEPMHLNAACDRLATSSKDGTIK
IWNVRTQAQNLTLSGHTDSVESIKWSGDGFLYSASRDRTIKVWNVDRGILVRTLTGHGHR
INTLALSSDYVLRTGPFDHRGTKFASEEAAQQAAQEKYEAFRAQGPERLVSGSDDFTLFL
WHPQESKHAIKRLTGHQQAVNHIAFSPDGRYFASASFDKKVKIWNGFSGDFLTTLTGHVG
AVYQVAWSSDSRYLVSASKDSTAKLWEMPSGKRARETLPGHADEVYALDWSPNGASVATG
SKDRTIKIWKH
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgacggaccgagcatcaacagcaactgtcgccgcaccgaacgctagtgctagtaccgct
ggtggcattgcgtgggcgggaagtctagtaggcgtcaacaaccccaacaatctcgggtac
cgctattcgacgccttccaaacggtaccgtaccacgctcgacgacggagacgatgcatcc
cgagatgttccgaccaacatccaagttcagtttcgtaatcgtcagggggaagacctcgcg
cagacgctggatttaccaacccagtcgacgatcgacgacttgaccgcgcttgtgcattcg
ctcctcgagaacagcgatagtcacgatgagcagcagcgacaaaagcaaggagccggaaag
atcccctacagcttttacgctacaatcttgaagaatggtgtgcaagatgatgtcgaaatc
acgcatacactctcggacctactccaacaacacgctatcagtaccgaagacgtcttgcag
ctcacctatcaaccgctggccgtctttcgggtccgtcccgtcacgcggtgtacagatact
ctgccaggacatacggaagcagttttgcacgtacagtacgccccggatggacaaatgcta
gcgtctggtgggggtgatactacggtacgcttttgggatgtgcatacatccacacccaag
tatacttgtaaacagcacaagaatcacgtcctttgtgttgcctgggctcccaacgggaaa
cgcttcgtatcggctgataaaaacggagtatggattgtttgggatcccactaaaggggaa
gccgtagggaaagcggtcaaggcacaccgtcaatggataacgtctttggcctgggaaccg
atgcacttgaacgccgcctgcgatcgactcgccacaagtagcaaggacggcaccatcaaa
atatggaatgtacggacgcaggctcaaaatctgaccttatccggtcataccgattccgtc
gaatcgatcaaatggagtggggacggatttttgtatagtgctagtcgggatcgtaccatt
aaagtatggaacgtcgatcgtggtattttagtgcgcaccctcaccgggcacggtcatcgc
atcaacaccctcgcacttagcagtgactacgtgttacgtaccggaccattcgatcaccgg
gggacgaaattcgcctcggaggaagcagctcaacaagccgcgcaagaaaagtacgaagcc
tttcgtgcccaaggccccgaacggttggtgtctgggtcggatgacttcaccctctttctc
tggcatcctcaggagagtaaacacgctatcaaacgactgaccgggcaccaacaagccgtg
aatcacattgcgtttagtccggatgggcgatatttcgccagcgcgagtttcgacaaaaag
gtcaaaatttggaatggtttctcgggggattttctcaccaccttgacgggtcatgtaggg
gctgtgtaccaggtagcttggagctctgactcacgatacttggtgagcgctagcaaagac
tccacggcgaaactgtgggaaatgcccagtggcaaacgggctcgtgagacattgccgggt
cacgccgacgaagtttacgctctagattggagccccaatggtgctagtgtcgcaacaggc
tcgaaagaccgtaccattaaaatttggaagcactga

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