Phaeodactylum tricornutum: PHATRDRAFT_24019
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Entry
PHATRDRAFT_24019 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_24019
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
PHATRDRAFT_24019
REST complex
PHATRDRAFT_24019
Heterochromatin formation proteins
Other heterochromatin formation proteins
PHATRDRAFT_24019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3_corepress
HHD_RTEL1
PAH_ZNF598
At4g15545_C
Spectrin_SYNE1
Spectrin_3
Motif
Other DBs
NCBI-GeneID:
7199201
NCBI-ProteinID:
XP_002185289
JGI:
24019
UniProt:
B7GDY4
LinkDB
All DBs
Position
29:<191978..>193524
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AA seq
414 aa
AA seq
DB search
MRGLRVEDALLYLDDVKREFRGRPHVYNEFLGIMKNFKSQEVDTPGVIARVSKLFRGYNK
LILGFNTFLPEGYKISLADLEQNQNQTVEFDHAISYVTTIKKRFVHDPSTYHQFLEILHT
YQKEQRGIKEVLEQVAHLFQDHPDLLKEFTFFLPDAVQEQAKERLHRAAAESETRLAAQR
QQQLEQYHVDTNVKSPANAVNRQPKFIDMTHASQAAALAPGPEPQRKHPLEGAPPASAMA
DQSESYVYNAAVERQFFDAAREAMSFSRDGGQAWAEFLKCLDMYAQEILTRTEMLTFVEQ
ILGKRNAKLLEEFKRILVSAGSPDGPAPLLEDSWYSVPLSEIDFSRCRRCTPSYRALPRD
YPAPPCGDRSDEEAKVLNDIWVSLPVGSEESYTFRHMRRNTYEETLFRVEDERF
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcttgcgtgtggaagatgctttattgtatctagatgacgtcaagcgtgagttt
agaggtcgtccacacgtctacaatgagttcctggggatcatgaagaacttcaaatcgcaa
gaagtcgatacgcctggagtcattgcgcgggtttccaagctgtttcggggatataacaag
cttattctgggttttaacacttttttgccggaagggtataaaatctcgttggcagatctg
gagcaaaatcagaaccaaacggtggaattcgatcacgcgatttcctacgtcacaacaatc
aagaagcggttcgtccacgatcctagtacgtatcaccagtttttggagatcctccatacc
tatcagaaggagcaacggggcatcaaggaagtcttagaacaagttgcccatctgtttcaa
gatcatccggatttgctcaaggaatttacttttttcttgcccgatgccgttcaagagcaa
gccaaggaacgcctgcatcgcgctgcggcggagtcggaaacgcgactcgccgctcaacgc
cagcagcaattggaacaatatcacgttgatactaatgtcaagagtcccgcgaatgccgtc
aatcgccagcccaaatttatcgacatgacacacgccagtcaggccgctgctctggctcca
ggcccggaaccacagcgtaagcatcctttagaaggggcgcccccggcctcggctatggcc
gatcaaagcgaatcgtacgtttacaatgctgctgtcgaacgccagttctttgacgctgca
cgtgaagccatgtcattcagtagggacggcggacaggcctgggccgagtttctcaagtgt
ctcgatatgtacgcccaagagattttgacgcgaacggagatgttgacattcgtggagcaa
attctgggcaagcggaacgcgaagttgttggaagagttcaagcgcatactggtgtcggct
ggatctcctgatggccccgctcctttgctggaagattcgtggtattctgtaccgttgtct
gagattgacttttctcgatgccgtcgctgcactccgtcgtatcgtgcgctgcctcgtgat
taccctgcaccaccttgtggtgatcgaagcgacgaggaggcaaaggttttgaatgacatc
tgggtctctttaccggtcggcagtgaggaaagctatacatttcgacacatgcgccgtaac
acgtatgaagagacgctctttcgagttgaggacgaacggttt
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